Gene Rleg2_0125 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRleg2_0125 
Symbol 
ID6978835 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhizobium leguminosarum bv. trifolii WSM2304 
KingdomBacteria 
Replicon accessionNC_011369 
Strand
Start bp117408 
End bp118427 
Gene Length1020 bp 
Protein Length339 aa 
Translation table11 
GC content62% 
IMG OID643394836 
Productperiplasmic binding protein/LacI transcriptional regulator 
Protein accessionYP_002279653 
Protein GI209547736 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1879] ABC-type sugar transport system, periplasmic component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.512688 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGAAAT CAGTTCTCGC TTTCGGCGCG CTCGCGCTTG GTGTCGCTTT TTCCGCGCCT 
GTCATGGCGG CTGACGTTTC GGCCTGCCTG ATCACCAAGA CCGACACCAA CCCCTTCTTC
GTCAAGATGA AGGAAGGTGC GACGGCCAAG GCCAAGGAAC TCGGCGTCTC GCTGAAGTCC
TATGCCGGCA AGATCGACGG TGACAGCGAA AGCCAGGTGG CAGCGATCGA AAGCTGCATC
GCCGACGGCG CCAAGGGCAT TCTGCTCACG GCTTCGGACA CCAAGGGCAT CGTGCCTGCG
GTCAAGAAGG CCCGCGACGC CGGCCTGCTG GTCATCGCTC TCGACACGCC GCTCGAGCCG
GCCGATGCTG CCGACGCCAC CTTCGCCACC GACAACCTGC TCGCCGGCAA GCTGATCGGC
CAGTGGGCCA AGGAAACCAT GGGCGACAAG GCCAAGGACG CCAAGGTCGG CTTCCTCGAC
CTGACGCCGT CGCAGCCGAC GGTCGACGTT CTCCGTGACC AGGGCTTCAT GATGGGCTTC
GGCATCGACC CGAAGAACCC GGACAAGATC GGCGACGAAG ACGACAAGCG CATCGTCGGT
CACGACGTGA CCAACGGCAA TGAAGAAGGC GGCCGCAAGG CCATGGAAAA CCTTCTGCAG
AAGGATCCGG GCATCAACGT CATCCACACG ATCAACGAGC CGGCCGCTGT CGGCGCCTAT
CAGGCGCTGA AGGCCGTCGG CATGGAAAAG AACGTGCTGA TCGTCTCCGT CGACGGCGGT
TGCCCGGGTG TGAAGTCGGT TAAGGAAGGC GTCATTGGCG CCACCTCGCA GCAATATCCG
CTGCTGATGG CGTCGCTCGG TATCGAGGCG ATCAAGAAGT TCGCCGATAG CGGCGAAAAG
CCGAAGCCGA CCGAAGGCAA GTCCTTCTTC GACACCGGCG TCTCGCTCGT CACCGACAAG
CCGGTTTCCG GCGTCAAGTC GATCGACACC AAGGAAGGCA CGGATAAGTG CTGGGGCTGA
 
Protein sequence
MKKSVLAFGA LALGVAFSAP VMAADVSACL ITKTDTNPFF VKMKEGATAK AKELGVSLKS 
YAGKIDGDSE SQVAAIESCI ADGAKGILLT ASDTKGIVPA VKKARDAGLL VIALDTPLEP
ADAADATFAT DNLLAGKLIG QWAKETMGDK AKDAKVGFLD LTPSQPTVDV LRDQGFMMGF
GIDPKNPDKI GDEDDKRIVG HDVTNGNEEG GRKAMENLLQ KDPGINVIHT INEPAAVGAY
QALKAVGMEK NVLIVSVDGG CPGVKSVKEG VIGATSQQYP LLMASLGIEA IKKFADSGEK
PKPTEGKSFF DTGVSLVTDK PVSGVKSIDT KEGTDKCWG