Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rleg2_0080 |
Symbol | |
ID | 6978789 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhizobium leguminosarum bv. trifolii WSM2304 |
Kingdom | Bacteria |
Replicon accession | NC_011369 |
Strand | - |
Start bp | 77463 |
End bp | 79256 |
Gene Length | 1794 bp |
Protein Length | 597 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 643394791 |
Product | putative inner membrane protein translocase component YidC |
Protein accession | YP_002279609 |
Protein GI | 209547692 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG0706] Preprotein translocase subunit YidC |
TIGRFAM ID | [TIGR03592] membrane protein insertase, YidC/Oxa1 family, C-terminal domain [TIGR03593] membrane protein insertase, YidC/Oxa1 family, N-terminal domain |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.0122237 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 0.388079 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAAAAAA ACCGCAATTA CTTCATTGCG ATCGCTCTCT CGGTGCTGAT CGTCCTCGGC TGGCAGTTTC TCTATATGAA TCCGCGCATC GAGGCCCAGC GCAAGGCGCA GGAAGCCCAG AAGGCGCAGC AGAAAACCGA ACAGGTGCAG CAGCCCGCAG CAAACGGCGC GGCGCCGGCG CCGACGAGTG GGACCGCCCC CTCGGGTCAG GCCGTCGCCA CGGCGACGCT CGAACAGGCG CTGGCAAAGA ACCCGCGCGT CGTCATCGAT ACGCCTGCGC TTTCCGGCTC GATCAACCTC GCCGGCGCCC GGCTCGACGA CCTGAAACTC AAGGGCTATC ACGAGACCGT CGACGACTCG AGCCCAACCA TCACCCTGTT CAGCCCGGCG GAAACCAAGG ACGGTTACTT CACCGAGCTC GGCTATATCG GCAGCGACGC CACGGGCAAC GTTCCCGGCG CCTCGACGCT CTGGACGGCG CCCGAGGGCG CCAAGCTCAC CGACAAGACG CCGGTGACGC TCTCCTATAC CAACGACAAG GGCCTGACCT TTACCCGGAC GATTTCCGTC GACGAACGCT ACATGTTCAC CGTCGCCGAC AAGGTCGAAA ATACCGGCCA GGCTCCGGTA TCACTGTCTT CCTACGGCCG CGTGACGCGT TACAACAAGC CGACGACGCC CTCCGTCTAC GTGCTGCATG AAGGCTTCAT CGGCGTCATC GGCGATGACG GCCTTGTCGA AACCAAATAT ACCGCCGCCG AGAAGGAAGC CGTCATGCCG CCGAAATCCA CCGGCGGCTG GCTTGGCATT ACCGACAAAT ACTGGGCCGC GACGATCATT CCGCCGCAGA CGTCGGCCTA TGAAGCACGC TTCTCGCATT TTGCCGATGG TCAGCCGCGC TATCAGGCCG ATTACAAGGA CGATGCCTTC ACCGTTGCGC CGGGCCAATC GATCGAGCTC AAGAACCTCG TCTTCGCCGG CGCCAAGGAA GTGCCCGTCA TCGACGGCTA CGAGACCAGC TATTCGATCC CGAAGTTCGA CCGGCTGATC GACTGGGGTT GGTTCTATTT CATCACCAAG CCGATGTTCA AGCTGATGGA CTTCTTCTAT CGCTTCTTCG GCAATTTCGG CGTGGCGATC CTGTGCACCA CCATCGTCGT CAAGGCGCTG TTCTTCCCGC TCGCCAGCAA GCAATATGCT TCGATGGCGA ACATGAAGCG CATGCAGCCG AAGATGGAGG AGCTGAAGGC GAAATTCGCC GACGACCGCA TGGGGCTGCA GCAGGCGACG ATGCAGCTCT ACAAGGAAGA GAAGATCAAC CCGATCGCCG GCTGCTGGCC GGTGGCGCTG CAGATCCCGA TCTTCTTCTC GCTCTACAAG GTGATCTACA TCACCATCGA GATGCGGCAC GCGCCGTTCT TCGGCTGGAT CAAGGACCTT TCGGCCCCCG ATCCGACGAC GATCGTCAAT CTGTTCGGCC TGCTGCCCTT CGAAGCGCCG ACCATCCTGC ATCTCGGCGT CTGGCCGCTG ATCATGGGCG TCACCATGTT CCTGCAGATG CGCATGAACC CGACGCCGCC CGATCCGACC CAGGCGATGA TCTTCACCTG GATGCCGCTG GTGTTCATGT TCATGCTGGC AAGCTTCCCG GCCGGCCTGG TCATCTACTG GGCCTGGAAC AACACGCTCT CGGTGATCCA GCAGTCGGTG ATCATGAAGC GCCAGGGCGT CAAGGTCGAA CTCTTCGACA ATCTGAAGGG CCTGTTCCGG CGAAAAACGG CGCCGTCGAA ATGA
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Protein sequence | MEKNRNYFIA IALSVLIVLG WQFLYMNPRI EAQRKAQEAQ KAQQKTEQVQ QPAANGAAPA PTSGTAPSGQ AVATATLEQA LAKNPRVVID TPALSGSINL AGARLDDLKL KGYHETVDDS SPTITLFSPA ETKDGYFTEL GYIGSDATGN VPGASTLWTA PEGAKLTDKT PVTLSYTNDK GLTFTRTISV DERYMFTVAD KVENTGQAPV SLSSYGRVTR YNKPTTPSVY VLHEGFIGVI GDDGLVETKY TAAEKEAVMP PKSTGGWLGI TDKYWAATII PPQTSAYEAR FSHFADGQPR YQADYKDDAF TVAPGQSIEL KNLVFAGAKE VPVIDGYETS YSIPKFDRLI DWGWFYFITK PMFKLMDFFY RFFGNFGVAI LCTTIVVKAL FFPLASKQYA SMANMKRMQP KMEELKAKFA DDRMGLQQAT MQLYKEEKIN PIAGCWPVAL QIPIFFSLYK VIYITIEMRH APFFGWIKDL SAPDPTTIVN LFGLLPFEAP TILHLGVWPL IMGVTMFLQM RMNPTPPDPT QAMIFTWMPL VFMFMLASFP AGLVIYWAWN NTLSVIQQSV IMKRQGVKVE LFDNLKGLFR RKTAPSK
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