Gene Rleg2_0072 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRleg2_0072 
Symbol 
ID6978781 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhizobium leguminosarum bv. trifolii WSM2304 
KingdomBacteria 
Replicon accessionNC_011369 
Strand
Start bp72029 
End bp72568 
Gene Length540 bp 
Protein Length179 aa 
Translation table11 
GC content60% 
IMG OID643394783 
ProductRNA polymerase, sigma-24 subunit, ECF subfamily 
Protein accessionYP_002279601 
Protein GI209547684 
COG category[K] Transcription 
COG ID[COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog 
TIGRFAM ID[TIGR02937] RNA polymerase sigma factor, sigma-70 family 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value0.44538 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.0452866 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAAGGCG ATGAGATTGC AGACCTGATC GGCCGCGTCG CGCTCCGCGA CCGCAGGGCC 
TTTGTGGCCC TTTACAATCA GACCGGGCCG AAACTTTTTG CCATCTGCCT GCGTATCTTG
AAGGATCGCA CGGAAGCCGA AGAAGCCCTG CAGGAAGTCT ATATCAGCAT CTGGCAGAGG
GCCGGAAGCT ACCAGTCAGC CACGGGTTCG TCCTCGGCCT GGTTGTCGGC GATCGCCCGT
AACCGGTCGA TCGACGCGTT GCGGTCGCGC AAGCCGGTCG CCGACGAAAT CGACAGTGCC
TATGATCTTG CCGACGCCGC GCCCGACCCG GAAATGCAGA CGGTGACGAA GGATGAAGGA
AGGCGGATTG ACACCTGCAT GGAAGAGTTG GAAGCTGATC GTGCGGTCGC GGTGAAACGG
GCTTATGTCG AAGGGCTGAG CTATCAGGAA CTGGCCGATC AGTTTGGTGT CCCGCTGAAC
ACGATGCGGA CCTGGCTCAG GCGCAGCCTG TTGAAACTGA GAGAGTGCAT GGAACGATGA
 
Protein sequence
MQGDEIADLI GRVALRDRRA FVALYNQTGP KLFAICLRIL KDRTEAEEAL QEVYISIWQR 
AGSYQSATGS SSAWLSAIAR NRSIDALRSR KPVADEIDSA YDLADAAPDP EMQTVTKDEG
RRIDTCMEEL EADRAVAVKR AYVEGLSYQE LADQFGVPLN TMRTWLRRSL LKLRECMER