| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rleg2_0061 |
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| Symbol | |
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| ID | 6978770 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhizobium leguminosarum bv. trifolii WSM2304 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011369 |
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| Strand | - |
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| Start bp | 61172 |
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| End bp | 62365 |
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| Gene Length | 1194 bp |
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| Protein Length | 397 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 643394772 |
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| Product | succinyl-diaminopimelate desuccinylase |
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| Protein accession | YP_002279590 |
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| Protein GI | 209547673 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0624] Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases |
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| TIGRFAM ID | [TIGR01246] succinyl-diaminopimelate desuccinylase, proteobacterial clade |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.03403 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCGCTA CCGATCCCGT CGCCAATCTT CAGACGCTGA TTCGCTGCCC CTCGGTGACT
CCAGCCGAAG GCGGCGCGCT GTCGGCGCTC GACGCCATGC TTGCGCCGCT CGGCTTCACC
GTCGACAAGG TGAAAGCGAG CGAAGCGGGA ACCGCCGATA TTGAAAACCT CTATGCCCGT
CTCGGCAAGG ACGGCCCGCA TCTGATGTTT GCCGGCCACA CCGATGTCGT GCCGGTCGGC
GACGAGGCCG ACTGGACGCA TCCGCCCTTC GCCGCCGAGA TATCGAAGGG CGAGCTCTTC
GGCCGCGGTG CCGTCGACAT GAAGGGCGGC ATCGCCTGCT TCATCGCCGC CGTCGCCCGC
CATATCGAGA AAAACGGGCC GCCCAAGGGC TCGATTTCCT TCCTGATCAC CGGCGATGAG
GAAGGCCCGG CGATCAACGG CACAATCAAG CTTCTGCGGT GGGCGGCCGA ACGCGGCGAG
CGCTGGGATG CCTGCCTGGT CGGCGAGCCC ACCAATCCGG ACAGGCTGGG CGACATGATC
AAGATCGGCC GGCGCGGCTC GCTGTCGGGC AAGATCACCG TGCACGGCGT CCAGGGCCAT
GCCGCCTATC CGCATCTTGC CGACAATCCG GTGCGCGGCA TGCTGCAGCT GACGCAGGCG
CTGATGGATC CGCCCTTCGA CGGCGGCACC GACGATTTCC AGCCCTCGAA CCTCGAGGTG
ACCACGGTCG ATGTCGGCAA TCCGGCGACC AACGTCATTC CGGCCAAGGC ATCGGCCAGC
TTCAACATCC GCTTCAACGA CAGCTGGACG GCCGAGACGC TGCGGGCCGA AATCCTGCGG
CGCCTCGACG CCGCCGCCGG AGACGGCCGG CTGCGGCCGG GCCGCGAACC GGTGAAATAC
GATATCGTCT GGGCCGACCG GCCGAGCCAT GTCTTCCTGA CCCGCAACAA TGCCCTGATC
GCGTCGCTGT CATCAGCCGT CGAAGGCGTG ATCGGCCGCT CGCCTAAGCT TTCCACAACC
GGCGGCACCT CGGATGCGCG TTTCATCAAG GATTATTGCC CGGTCGTCGA GTTCGGCCTC
GTCGGCCAGA CGATGCACAT GGTCGACGAG CGCGTCGCCG TTTCCGATCT GGAGACGCTG
ACGGCGATCT ACGAGACCTT CATTGCCCAC TGGTTCGCCA ATGCCGGGGC TTAG
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| Protein sequence | MTATDPVANL QTLIRCPSVT PAEGGALSAL DAMLAPLGFT VDKVKASEAG TADIENLYAR
LGKDGPHLMF AGHTDVVPVG DEADWTHPPF AAEISKGELF GRGAVDMKGG IACFIAAVAR
HIEKNGPPKG SISFLITGDE EGPAINGTIK LLRWAAERGE RWDACLVGEP TNPDRLGDMI
KIGRRGSLSG KITVHGVQGH AAYPHLADNP VRGMLQLTQA LMDPPFDGGT DDFQPSNLEV
TTVDVGNPAT NVIPAKASAS FNIRFNDSWT AETLRAEILR RLDAAAGDGR LRPGREPVKY
DIVWADRPSH VFLTRNNALI ASLSSAVEGV IGRSPKLSTT GGTSDARFIK DYCPVVEFGL
VGQTMHMVDE RVAVSDLETL TAIYETFIAH WFANAGA
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