Gene Rleg2_0017 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRleg2_0017 
Symbol 
ID6978726 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhizobium leguminosarum bv. trifolii WSM2304 
KingdomBacteria 
Replicon accessionNC_011369 
Strand
Start bp16296 
End bp16811 
Gene Length516 bp 
Protein Length171 aa 
Translation table11 
GC content59% 
IMG OID643394728 
Productprotein of unknown function UPF0054 
Protein accessionYP_002279546 
Protein GI209547629 
COG category[R] General function prediction only 
COG ID[COG0319] Predicted metal-dependent hydrolase 
TIGRFAM ID[TIGR00043] metalloprotein, YbeY/UPF0054 family 


Plasmid Coverage information

Num covering plasmid clones38 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.276542 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAGAAC TCGACATCCA GATCAGCGTC GACGACATCG GCTGGCCGGG CGAGGAGACG 
CTGCTGTCCT TTTGCGAACG CGTGCTCGGC GCAGCCGTGA TCTATCTCCG CGACAGCGAG
AAACAGCCCT TCCCGACGAT GCCGCCCGAG GTCTCGCTTG TCTTCACCGA CGACGCCTCG
ATCCAGGACA TCAATGCCGA ATGGCGCGGC AAGGACAAGG CGACCAACGT GCTCTCCTTT
CCGGCCTTTC CGGTTCGGCC CGGCAAGATG CCCGGTCCGA TGCTCGGCGA CATCATCATC
GCCCGGGAGA CTGTGGAGCG GGAAACCATC GAGCTCGAAA AGAGTTTCGA CGACCACCTG
ACCCATCTTC TGGTGCACGG TTTCTTGCAT CTTCTCGGCT ACGACCATAT GAATAGTGAC
GAAGCCGAAA TTATGGAGGG GCTGGAGACT CGCATTTTGG CGCAGCTCGG CCTATCTGAT
CCCTACGAGG GTCAAGACCT TAAAATGGAA CCATGA
 
Protein sequence
MAELDIQISV DDIGWPGEET LLSFCERVLG AAVIYLRDSE KQPFPTMPPE VSLVFTDDAS 
IQDINAEWRG KDKATNVLSF PAFPVRPGKM PGPMLGDIII ARETVERETI ELEKSFDDHL
THLLVHGFLH LLGYDHMNSD EAEIMEGLET RILAQLGLSD PYEGQDLKME P