Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rleg2_5608 |
Symbol | |
ID | 6978702 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhizobium leguminosarum bv. trifolii WSM2304 |
Kingdom | Bacteria |
Replicon accession | NC_011368 |
Strand | - |
Start bp | 1254478 |
End bp | 1255761 |
Gene Length | 1284 bp |
Protein Length | 427 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 643394706 |
Product | extracellular solute-binding protein family 1 |
Protein accession | YP_002279524 |
Protein GI | 209547606 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1653] ABC-type sugar transport system, periplasmic component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 0.959607 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 35 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACACATC GGATAAAGCG CATTCTTGCG GGCGCATCCA CGCTTCTGGC GTTGGCCGCG GCCGGCCCGT CGCATGCAGA AACCACGCTG TCTTTCCTGA TCGACAACAA TCCCGACACG GTCGCAGCAG CCGAGGCCTT GGTTGCCGCC TATCAGACCA AGGCGCCCGG CGTGACGATC GAAATCGAAC AGCGGCCGGG CGGCGGCGAG GGCGACAACA TCATCAAGAC GCGCCTGGCG ACGGGGGAGA TGTCCGATGT ATTCCTCTAT AATTCGGGTT CGCTCTTGCA GGCGCTGAAG CCCACGCAGA AACTGGTCGA TCTGAGCGGC CTGCCGTCAC AGGCAAAGGT GGACGAAAGC TTCAAGGCGG TGGTCAGCGC CGACGGCAAG CTCTATGGCG TTCCCTTCGG CACGGCGATG GCCGGCGGGA TCCTCTACAA CAGGAAGATC TATCAGGATC TCGGCCTCTC CGTTCCGAAG ACATGGGCGG ATTTCATGGC GAACAACGCC AAGGTCAAGG CATCCGGCAA GGTCGCCGTG GCGCAGACCT ATCGCGATAC GTGGACCTCG CAGCTGTTCG TTCTGGCCGA TTATTACAAT CTGCATGCCG CCGTGCCGAA CTTTGCCGCC GACTATACCG CCAACAAGGC GAAATATGCC GAGACGCCGG CGGCAATGAA GGGCTTCGAA CGGCTGAAGG ACGTTCATGA TGCCGGCCTG ATGAACGAAG ACTTCGGCGC GGCAAGCTAC GACGACGGCT TGAGAATGGT GTCGACCGGC GAGGCAGCGC ATTATCCGAT GCTGAGCTTC GCAGTCAGCG CGCTCAAGCA GAATTATCCG GAGAACCTCG CAGATGTCGG CTTCTTCGCC CAGCCGAGCG ACGATGCCGC AACGAACGGC CTGACGGTCT GGATGCCGCC GGGCCTTTAC ATTCCTGCGA CCAGTCAGCA TGCCGAGGAA GCGAAAAAAT TCGTCGATTT CGCCGGGAGC GTCGAGGGCT GCAAGATCAT GGTGGAAACC AACGCGGTCC AGGGCCCCTC CCTGGTCGAC GGCTGCGACC TGCCTGCCGA CGTGCCGCCG GCGATCAAGG ATATGCTTCC CTATTTCGAG GCCAAGGACA AGACGACCCC GGCCCTGGAA TTCGTTTCTC CCGTCAAGGG ACCGGCGCTC GAGCAGATCA CCGTCGAGGT CGGCTCCGGC ATTCGCCAAC CAGCCGAGGC GGCGAAACTC TATGATGAGG ATGTGCGCAA GCAGGCCAAG CAGCTCGGCC TGCCCAACTG GTAG
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Protein sequence | MTHRIKRILA GASTLLALAA AGPSHAETTL SFLIDNNPDT VAAAEALVAA YQTKAPGVTI EIEQRPGGGE GDNIIKTRLA TGEMSDVFLY NSGSLLQALK PTQKLVDLSG LPSQAKVDES FKAVVSADGK LYGVPFGTAM AGGILYNRKI YQDLGLSVPK TWADFMANNA KVKASGKVAV AQTYRDTWTS QLFVLADYYN LHAAVPNFAA DYTANKAKYA ETPAAMKGFE RLKDVHDAGL MNEDFGAASY DDGLRMVSTG EAAHYPMLSF AVSALKQNYP ENLADVGFFA QPSDDAATNG LTVWMPPGLY IPATSQHAEE AKKFVDFAGS VEGCKIMVET NAVQGPSLVD GCDLPADVPP AIKDMLPYFE AKDKTTPALE FVSPVKGPAL EQITVEVGSG IRQPAEAAKL YDEDVRKQAK QLGLPNW
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