Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rleg2_5589 |
Symbol | |
ID | 6978683 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhizobium leguminosarum bv. trifolii WSM2304 |
Kingdom | Bacteria |
Replicon accession | NC_011368 |
Strand | + |
Start bp | 1233635 |
End bp | 1234645 |
Gene Length | 1011 bp |
Protein Length | 336 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 643394687 |
Product | extracellular solute-binding protein family 1 |
Protein accession | YP_002279505 |
Protein GI | 209547587 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0687] Spermidine/putrescine-binding periplasmic protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 30 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAACGA CATTTGCTTT CGCGGCGGTT GCCGCATTCG TCGCGGTCTC CGCGCCGGCC AAAGCCGACA ACATGGTCTT CTCGAGCTGG GGCGGAACGA CCCAGGATGC GCAGAAGGCG GCATGGGCGA GCCCCTTCAC CGAAAAGACC GGCATCACCG TCGTGCAGGA CGGCCCGACC GACTACGGCA AGCTGAAGGC CATGGTCGAG GCCGGCGAAG TCACCTGGGA CGTCGTCGAC GTCGAAGGCG ATTATGCCGC CCAGGCCGGC AAGAACGGCC AGCTCGAGAA GCTCGACTTC TCCGTCATCG ACAAATCCAA GCTCGATCCG CGCTTCGTCA CCGACTATTC GGTCGGCAGC TTCTATTATT CCTTCGTCAT CGGCTGCAAT GCCGATGCCG TCAAAGCCTG CCCGAAAACA TGGGCTGACC TGTTCGACAC GGCAAAGTTC CCCGGCAAGC GCACATTCTA CAAGTGGTCG GCTCCGGGCG TGATCGAAGC GGCGCTGCTT GCCGACGGCG TGGCTGCCGA CAAGCTTTAT CCGCTTGACC TCGACCGCGC CTTCAAGAAG CTCGATACGA TCAAATCGGA CATCATCTGG TGGTCGGGCG GCGCCCAGTC GCAGCAGCTC CTGGCATCCG CCGAAGCGCC CTTCGGCAGC GTCTGGAACG GCCGCATGAC GGCGCTTGCC GCCACCGGCA TCAAGGTTGA AACCTCCTGG GAACAGAACA TCACCGCTGC CGATGCGCTC GTCGTGCCGA AGGGCTCGCC GAATGTCGAA TCCGCGATGA AGTTCATTGC GCTGGCGACC TCGGCCGAAC CGCAGGCCGC TCTGGCAAAA GCCACCGGAT ATGCGCCGAT CAATGTCGAC TCCGCCAAGC TGATGGACCC GGAAACGGCC AAGACCCTGC CGGACCAGCA GACAGCAAGC CAGGTCAATG CCGATATGAC CTATTGGGCT GATAATCGCG ATGCCATCGG CGAGAAGTGG TACGCTTGGC AGGCGAAATA A
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Protein sequence | MKTTFAFAAV AAFVAVSAPA KADNMVFSSW GGTTQDAQKA AWASPFTEKT GITVVQDGPT DYGKLKAMVE AGEVTWDVVD VEGDYAAQAG KNGQLEKLDF SVIDKSKLDP RFVTDYSVGS FYYSFVIGCN ADAVKACPKT WADLFDTAKF PGKRTFYKWS APGVIEAALL ADGVAADKLY PLDLDRAFKK LDTIKSDIIW WSGGAQSQQL LASAEAPFGS VWNGRMTALA ATGIKVETSW EQNITAADAL VVPKGSPNVE SAMKFIALAT SAEPQAALAK ATGYAPINVD SAKLMDPETA KTLPDQQTAS QVNADMTYWA DNRDAIGEKW YAWQAK
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