| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rleg2_5566 |
|---|
| Symbol | |
|---|
| ID | 6978660 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhizobium leguminosarum bv. trifolii WSM2304 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011368 |
|---|
| Strand | + |
|---|
| Start bp | 1215093 |
|---|
| End bp | 1216028 |
|---|
| Gene Length | 936 bp |
|---|
| Protein Length | 311 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 643394664 |
|---|
| Product | extracellular solute-binding protein family 3 |
|---|
| Protein accession | YP_002279482 |
|---|
| Protein GI | 209547564 |
|---|
| COG category | [E] Amino acid transport and metabolism
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 0.306318 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 29 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATTGCCT TTCCGGCATT GCGGACCCTG CTGATCGCCG CCATGGCGTC CGGCCTTTCC
TTCGGCGCAA CTCGTGCGGC CGACGATTTC GACCTGAGCC CGCAGCAGCC GGGCAGGCTG
CATGCCGCCA GGAACGAGGC GGCAATCGCT GCGATCCCCA AGGAGTTCAA GTTCGTCACG
CCAGGCAAGT TCACCATCGC CGTCAGTCCG GGCGGTCCGC CGCTTGCGAC CTATGCCACC
GACGCCAAGA CCGTCGTCGG GGCGGATCCC GATTATGCCT ATGCCATCGC CGACAGCCTC
GGCCTGACGC TGGAGATTGT GCCCGTGGCC TGGATCGACT GGCCGCTCGG CCTCGCCTCC
GGCAAGTATG ATGCCGTCAT TTCCAATGTC GGGGTCACCG AACAGCGCAA GGAGAAGTTC
GATTTCTCCA CCTATCGTCA GGGCCTGCAT GGCTTCTTCG TGAAATCCGA CAGCCCCATC
ACCTCGATCA AGCAGCCGAA GGATGCGGCG GGTTTGAGGA TCATCGTCGG GGCCGGAACC
AACCAGGAGC GCATCCTGGT GAAGTGGAGC GACGAGGATG TCGCCGCCGG CCTGAAGCCG
ATCGAGCTGC AATATTACGA CGACGAGGCG GCAAGCCTCC TCGCGCTCCG TTCCGGTCGG
GCCGATGTCA TCGTGCAGCC GCATGCGCAG CTCGTCTTCA TCGCGGCGCG CGACAAGAAC
ATCAAGCGTG TGGGCACGCT GAGCGCCGGC TGGCCCGATC GTTCCGACGT TGCGATCACC
ACCCGCAAGG GAAGCGGGCT CGCCGATGCG CTGACCGTCG CCACCAACGG CCTGATCAAG
GACGGCAGCT ACGCGAAGAT CCTCGATCAC TGGCATCTGT CCGAGGAAGC CTTGCCGGCA
TCCGAGACCA ATCCGCCCGG CCTGCCGAAA TACTGA
|
|---|
| Protein sequence | MIAFPALRTL LIAAMASGLS FGATRAADDF DLSPQQPGRL HAARNEAAIA AIPKEFKFVT
PGKFTIAVSP GGPPLATYAT DAKTVVGADP DYAYAIADSL GLTLEIVPVA WIDWPLGLAS
GKYDAVISNV GVTEQRKEKF DFSTYRQGLH GFFVKSDSPI TSIKQPKDAA GLRIIVGAGT
NQERILVKWS DEDVAAGLKP IELQYYDDEA ASLLALRSGR ADVIVQPHAQ LVFIAARDKN
IKRVGTLSAG WPDRSDVAIT TRKGSGLADA LTVATNGLIK DGSYAKILDH WHLSEEALPA
SETNPPGLPK Y
|
|---|
| |