Gene Rleg2_5555 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRleg2_5555 
Symbol 
ID6978649 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhizobium leguminosarum bv. trifolii WSM2304 
KingdomBacteria 
Replicon accessionNC_011368 
Strand
Start bp1203378 
End bp1204595 
Gene Length1218 bp 
Protein Length405 aa 
Translation table11 
GC content62% 
IMG OID643394653 
Productplasmid partitioning protein RepA 
Protein accessionYP_002279471 
Protein GI209547553 
COG category[D] Cell cycle control, cell division, chromosome partitioning 
COG ID[COG1192] ATPases involved in chromosome partitioning 
TIGRFAM ID[TIGR03453] plasmid partitioning protein RepA 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.661673 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGACCA AGGCCGCGAT TGTTGAGAAA GCCAGGAGAG CCAGTCAAGT CTCGATCGAC 
GAGACGATTT CGCAGGATTC GACAATGCTC AGCAGCCAGC TCCAGGTGCT GTTCGAGCGG
TTGTTTTCGC CCGACGCCCG CAAATCGCTG CGGCGGTTCA GCAGCACCGA GGCCGCCAAG
CTGCTCGGCG TCACCGACAG CTACGTTCGC CACCTCGCCG CCCAGGTGGA AACCATCAAT
CCCGAAAAGA CGGCGTCCGG ACGGCGGGTG TTCTCGCTTG AGGAAATCCA TGCGATGCGC
CAGCATCTCG GGCGCACCAA ACCCTCTTAT CTGCCGATGC GCCGGCCGGG CGACCATCTC
CAGGTGATCG CCGTCACCAA TTTCAAGGGC GGCTCCGGCA AGACGACGAC ATCGATCCAT
CTGGCGCAGT TCCTGGCGTT GCGCGGCTAT CGCGTTCTCG CCGTCGATCT CGACCCGCAG
GCGTCGATGT CGGCGATGCT CGGCTATCAG CCGGAATTCG ACGTCGGCGA AAACGAGACG
CTCTATGGCG CCATCAAATA CGACGAGACG CGCCGCGACG TCGCAGACAT CGCCCGCCAG
ACCTACTTCC CCGGCCTCGA TCTCATCCCC GGCAATCTCG AGCTGCACGA GTTCGAGCAC
GATACCCCAA AGGCGCTGGC CGATAGCAAC CGCGACGACA AGGACATGTT CTTCATGCGG
GTCGGCAATG CGCTGCATTC GCTGGAAGAG AGCTACGACG TCGTCATTAT CGATTGCCCG
CCTACCCTCG GCTTCCTGAC GCTGTCTGCT CTTTGCGCCG CCACGGCCGT GCTCATTACC
GTTCATCCGC AGATGCTCGA CGTTGCCTCG ATGAACCAGT TCCTGACGAT GACCTCCGAC
CTTCTGTCCG TGGTCAAGGA GGCCGGCGGC AATCTCGATT ACGACTGGAT GCGTTATCTC
GTCACCCGTT ATGAGGCCAA TGATGGCCCG CAGGCGCAGA TCGTCGCCTT CCTGCGCAGC
CTGTTCGGCG AGCGCGTGCT GACCTCGATG ATGGTCAAGT CGACGGCTGT TTCGGATGCG
GGCCTGTCCA AGCAGACGAT CTACGAGGCG GGACGCGAGA CGATGCATCG CCAGACCTAC
GACCGCGGCG TCGAATCCGT CGACAACGTC AATGCCGAGG TCGAGCAACT CATTCGCAGT
GCATGGAGCA GGACATGA
 
Protein sequence
MPTKAAIVEK ARRASQVSID ETISQDSTML SSQLQVLFER LFSPDARKSL RRFSSTEAAK 
LLGVTDSYVR HLAAQVETIN PEKTASGRRV FSLEEIHAMR QHLGRTKPSY LPMRRPGDHL
QVIAVTNFKG GSGKTTTSIH LAQFLALRGY RVLAVDLDPQ ASMSAMLGYQ PEFDVGENET
LYGAIKYDET RRDVADIARQ TYFPGLDLIP GNLELHEFEH DTPKALADSN RDDKDMFFMR
VGNALHSLEE SYDVVIIDCP PTLGFLTLSA LCAATAVLIT VHPQMLDVAS MNQFLTMTSD
LLSVVKEAGG NLDYDWMRYL VTRYEANDGP QAQIVAFLRS LFGERVLTSM MVKSTAVSDA
GLSKQTIYEA GRETMHRQTY DRGVESVDNV NAEVEQLIRS AWSRT