Gene Rleg2_5543 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRleg2_5543 
Symbol 
ID6978637 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhizobium leguminosarum bv. trifolii WSM2304 
KingdomBacteria 
Replicon accessionNC_011368 
Strand
Start bp1193832 
End bp1194491 
Gene Length660 bp 
Protein Length219 aa 
Translation table11 
GC content58% 
IMG OID643394642 
Productpolar amino acid ABC transporter, inner membrane subunit 
Protein accessionYP_002279460 
Protein GI209547542 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0765] ABC-type amino acid transport system, permease component 
TIGRFAM ID[TIGR01726] amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 


Plasmid Coverage information

Num covering plasmid clones38 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.468657 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCGAGT TCACACTCTG GGACATACTG CGCAACCTGC TCCTCGCCAC CCGCTGGACG 
ATCCTGCTTT CGCTCGTCTC GTTCGTTGGC GGCGGAGCGG TCGGACTGGG GCTGCTGTTC
CTGCGCATCA GCAAGCGTAA GTCATTCAAG GTGCTGGCGA AATATTACAT AGAACTTTTC
CAGGGCACCC CGCTGCTGAT GCAGCTCTTC ATCGCTTTTT TCGGTCTCGG CCTCTTCGGC
ATCGACGTAC CGGCCTGGCT TGCCGCGGGA TTGACGCTCA CTCTCTGGAG TGCCGCTTTC
CTCGCCGAAA TCTGGCGAGG CTGCGTCGAA TCGATCGCGA GGAGCCAATG GGAAGCTTCC
GCCAGCCTCG GCATGGGACG GTTGCAGCAA ATGCGTTACG TCATCCTCCC GCAGGCGCTG
AGAGTTGCCA TACCGCCCAC GGTCGGTTTC TCCGTTCAAA TCATCAAAGG TACGGCGCTG
ACCTCGATCA TCGGTTTCGT CGAACTGTCG AAAGCCGGCA CCGTGGTTAC CAATGCGACC
TTCCAACCCT TCACGGTCTA CGGGCTCGTC GCCCTCATCT ACTTCGCCCT TTGCTGGCCT
TTGTCAAAAA GCAGCCAGAT CCTGGAAAGG AAGCTCAATG TCGCTCATCG AAATCACTGA
 
Protein sequence
MIEFTLWDIL RNLLLATRWT ILLSLVSFVG GGAVGLGLLF LRISKRKSFK VLAKYYIELF 
QGTPLLMQLF IAFFGLGLFG IDVPAWLAAG LTLTLWSAAF LAEIWRGCVE SIARSQWEAS
ASLGMGRLQQ MRYVILPQAL RVAIPPTVGF SVQIIKGTAL TSIIGFVELS KAGTVVTNAT
FQPFTVYGLV ALIYFALCWP LSKSSQILER KLNVAHRNH