Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rleg2_5543 |
Symbol | |
ID | 6978637 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhizobium leguminosarum bv. trifolii WSM2304 |
Kingdom | Bacteria |
Replicon accession | NC_011368 |
Strand | + |
Start bp | 1193832 |
End bp | 1194491 |
Gene Length | 660 bp |
Protein Length | 219 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 643394642 |
Product | polar amino acid ABC transporter, inner membrane subunit |
Protein accession | YP_002279460 |
Protein GI | 209547542 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0765] ABC-type amino acid transport system, permease component |
TIGRFAM ID | [TIGR01726] amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family |
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Plasmid Coverage information |
Num covering plasmid clones | 38 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 0.468657 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATCGAGT TCACACTCTG GGACATACTG CGCAACCTGC TCCTCGCCAC CCGCTGGACG ATCCTGCTTT CGCTCGTCTC GTTCGTTGGC GGCGGAGCGG TCGGACTGGG GCTGCTGTTC CTGCGCATCA GCAAGCGTAA GTCATTCAAG GTGCTGGCGA AATATTACAT AGAACTTTTC CAGGGCACCC CGCTGCTGAT GCAGCTCTTC ATCGCTTTTT TCGGTCTCGG CCTCTTCGGC ATCGACGTAC CGGCCTGGCT TGCCGCGGGA TTGACGCTCA CTCTCTGGAG TGCCGCTTTC CTCGCCGAAA TCTGGCGAGG CTGCGTCGAA TCGATCGCGA GGAGCCAATG GGAAGCTTCC GCCAGCCTCG GCATGGGACG GTTGCAGCAA ATGCGTTACG TCATCCTCCC GCAGGCGCTG AGAGTTGCCA TACCGCCCAC GGTCGGTTTC TCCGTTCAAA TCATCAAAGG TACGGCGCTG ACCTCGATCA TCGGTTTCGT CGAACTGTCG AAAGCCGGCA CCGTGGTTAC CAATGCGACC TTCCAACCCT TCACGGTCTA CGGGCTCGTC GCCCTCATCT ACTTCGCCCT TTGCTGGCCT TTGTCAAAAA GCAGCCAGAT CCTGGAAAGG AAGCTCAATG TCGCTCATCG AAATCACTGA
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Protein sequence | MIEFTLWDIL RNLLLATRWT ILLSLVSFVG GGAVGLGLLF LRISKRKSFK VLAKYYIELF QGTPLLMQLF IAFFGLGLFG IDVPAWLAAG LTLTLWSAAF LAEIWRGCVE SIARSQWEAS ASLGMGRLQQ MRYVILPQAL RVAIPPTVGF SVQIIKGTAL TSIIGFVELS KAGTVVTNAT FQPFTVYGLV ALIYFALCWP LSKSSQILER KLNVAHRNH
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