| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rleg2_5521 |
|---|
| Symbol | |
|---|
| ID | 6978615 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhizobium leguminosarum bv. trifolii WSM2304 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011368 |
|---|
| Strand | + |
|---|
| Start bp | 1169650 |
|---|
| End bp | 1170831 |
|---|
| Gene Length | 1182 bp |
|---|
| Protein Length | 393 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 643394620 |
|---|
| Product | ectoine utilization protein EutD |
|---|
| Protein accession | YP_002279438 |
|---|
| Protein GI | 209547520 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0006] Xaa-Pro aminopeptidase |
|---|
| TIGRFAM ID | [TIGR02993] ectoine utilization protein EutD |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
|---|
| Fosmid unclonability p-value | 0.00590765 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGACCCAGC CCAACCTCAA ATTCTCGCTC GGCGAATATG CCGCGCGGCT GGAAAAGACG
CGGCGCGCCA TGGAGGCGAA GGGCGTCGAC CTGCTTATTG TCAGCGACCC GTCGAACATG
GCCTGGCTGA CCGGTTATGA CGGCTGGTCT TTCTACGTGC ACCAGGCAGT GATCGTGCCG
CCGCAGGGCG AGCCGATCTG GTTCGGCCGC GGCCAGGATG CCAACGGCGC CAAGTTCACC
ACCTATCTGA AGCACGACAA CATCGTCGGT TATCCCGATC ATTACGTGCA GTCGACCGAG
CGCCATCCGA TGGATTACCT CTCGGGCATC CTGACGGAGC GCGGCTCTAG CAAGCTGACG
ATCGGCGTCG AGATGGACAA TTACTGGTTC TCGGCGGCCG CCTTCGCCGC GCTGCAGAAA
CATCTGCCGC ATGCGCGCTT CGTCGACGCG ACGGCGCTGG TCAACTGGCA GCGCGCGGTC
AAGAGCGAGA CCGAGATCAA ATATATGCGC AATGCCGCCC GCATCGTCGA AGCGATGCAT
GCCCGCATCT TCGACAAGAT CGAAGTTGGC ATGCGCAAAT GCGATCTAGT CGCGGAAATC
TATGATGCCG GCACTCGCGG CGTCGACGGC ATCGGCGGCG ATTATCCAGC GATCGTGCCG
CTGCTGCCGT CCGGCGTTGA AGCATCCGCG CCGCATCTAA CCTGGGACGA CCGGCCGCTG
AAGAAGGGCG AGGGCACCTT CTTCGAGATT GCCGGCTGCT ACCACCGCTA TCACCTGCCA
CTGTCGCGCA CCGTCTTCCT CGGCAAGCCG ACGCAGGCCT TTCTCGATGC CGAGAAGGCG
ACATTGGAAG GCATGGAGGC CGGTCTTGCC GTTGCCAAGC CCGGCAACAC CTGCGAGGAC
ATCGCCAACG CCTTCTTCGC CGTGCTGAAG AAATACGGCA TCGTCAAGGA CAACCGCACC
GGTTACCCGA TCGGTCTGTC CTATCCGCCG GACTGGGGCG AGCGCACCAT GAGCCTGCGG
CCGGGCGACC GGACCGAGTT GAAGCCCGGC ATGACTTTCC ATTTCATGAC TGGCCTCTGG
CTCGACGACA TGGGTTTCGA AACGACCGAG AGCATCCTGA TCACCGAGAG CGGTGTCGAA
TGTTTCGCCA ATGTGCCGCG CAGGCTGATG GTCAAGGATT GA
|
|---|
| Protein sequence | MTQPNLKFSL GEYAARLEKT RRAMEAKGVD LLIVSDPSNM AWLTGYDGWS FYVHQAVIVP
PQGEPIWFGR GQDANGAKFT TYLKHDNIVG YPDHYVQSTE RHPMDYLSGI LTERGSSKLT
IGVEMDNYWF SAAAFAALQK HLPHARFVDA TALVNWQRAV KSETEIKYMR NAARIVEAMH
ARIFDKIEVG MRKCDLVAEI YDAGTRGVDG IGGDYPAIVP LLPSGVEASA PHLTWDDRPL
KKGEGTFFEI AGCYHRYHLP LSRTVFLGKP TQAFLDAEKA TLEGMEAGLA VAKPGNTCED
IANAFFAVLK KYGIVKDNRT GYPIGLSYPP DWGERTMSLR PGDRTELKPG MTFHFMTGLW
LDDMGFETTE SILITESGVE CFANVPRRLM VKD
|
|---|
| |