| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rleg2_5517 |
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| Symbol | |
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| ID | 6978611 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhizobium leguminosarum bv. trifolii WSM2304 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011368 |
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| Strand | + |
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| Start bp | 1166191 |
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| End bp | 1166850 |
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| Gene Length | 660 bp |
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| Protein Length | 219 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 643394616 |
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| Product | ectoine/hydroxyectoine ABC transporter, permease protein EhuD |
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| Protein accession | YP_002279434 |
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| Protein GI | 209547516 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0765] ABC-type amino acid transport system, permease component |
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| TIGRFAM ID | [TIGR01726] amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family
[TIGR03003] ectoine/hydroxyectoine ABC transporter, permease protein EhuD |
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Plasmid Coverage information |
| Num covering plasmid clones | 37 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.002332 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGAATGGG ATTGGGACTT CGTCTGGCAG ATCATGCCGA CCCTTCTCGA GGGGTTCAAG
ATCACCATAC TCGCGACCAT CCTCGGCGCT GCCGTCGCCA TGGTCGCAGG CCTTGGCCTT
GCCATTGCGC GGCGGTCATC GGTCGCCGCC ATTTCGAGAA CGGTCGGTTT CGTCTCGGAA
TTCATCCGCG GCACGCCGCT GCTGGTGCAG CTCTACTTCA TTTTCTACGT GTTGCCGGAT
ATCGGCATCC GGCTGTCGCC GCTCACCGCC GGTGTCATCG GCATGGGCAT TCACTATGCG
ACCTATACGG CCGAGGTCTA TCGCGCCGGC ATCGAGAATG TGCCGCGCGG ACAGTGGGAA
GCCGCCAAGG CCACCAATCT GACGACGCGC CAGGCCTGGA TCCACGTGGT CCTGCCGCAG
GCAATCCCGC CGATGATCCC GGCGCTCGCC AATTATTTCA TCGCCATGTT CAAGGAGACG
CCGCTGCTTT CGGCGATCAC CGTGCTCGAA TTGATGAACC AGGCAAAGAG CATCGCCAAC
AGCAATTACC GCTACATCGA GCCGATGACG CTGGTCGGGG TCTTCTTCCT CGTTATCAGC
CTGATCTCGG TCGTGGGCTT GCGCTGGCTC GAGGAGCGTT ACGCCAGGAT GGATGATTGA
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| Protein sequence | MEWDWDFVWQ IMPTLLEGFK ITILATILGA AVAMVAGLGL AIARRSSVAA ISRTVGFVSE
FIRGTPLLVQ LYFIFYVLPD IGIRLSPLTA GVIGMGIHYA TYTAEVYRAG IENVPRGQWE
AAKATNLTTR QAWIHVVLPQ AIPPMIPALA NYFIAMFKET PLLSAITVLE LMNQAKSIAN
SNYRYIEPMT LVGVFFLVIS LISVVGLRWL EERYARMDD
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