Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rleg2_5503 |
Symbol | |
ID | 6978597 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhizobium leguminosarum bv. trifolii WSM2304 |
Kingdom | Bacteria |
Replicon accession | NC_011368 |
Strand | + |
Start bp | 1151955 |
End bp | 1153757 |
Gene Length | 1803 bp |
Protein Length | 600 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 643394602 |
Product | putative transcriptional regulator, PucR family |
Protein accession | YP_002279420 |
Protein GI | 209547502 |
COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism [T] Signal transduction mechanisms |
COG ID | [COG2508] Regulator of polyketide synthase expression |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.00160149 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | TTGGATCAGA GGTCCCGTGT ACTGGCGCTG CGAGACGTCG CCAGCCAAAT TAACAGCGGC GGCGATCTCC AGGCCATTCT CCAGCAGCTG ATTGCCGCCG CCTGCCGCCA TGCCGATTGG GCGTTGGGAT CGATCATGAG CATCGACGCC GCGCATGGTT ATGCCTATGT CATCGTACGC TACGATCCGA CACTGATAGA ACGGCAGCTG CCGGACAAAT GGGAGTTGGC GACAAGCCCG TCGTTAATCG CTCTGCAGCG AAACGAGCCC GTCTATATCC CCGATGCCCG CGAGTCCGCC GAGTTCCCCG GCTATCGGGC GGAAGCCTTC GAGCGTGACT ACCGCACCGT CTTGGTTTTG CCCATGAACT GCAAGGATGC GGAAGGCCGC CCGATGGTCC TCAGCGTCAT CGCCCGACAG ATCACCGAAG TATCGGAAGA CGATCTTGCC TTCCTCGGCA CCATCATTCA TCTGGGTGCA ATTGCCGTGG AGCGCGAACA CCGGCTTGAA GCAGAGAAGC GGTCAGCGCA GCGGCTCGAG AAAGCCCTGA AAGCGCATAC GTCACTGCTT GAGCATGTTT TAAGCGACGG GTCCGTCGCT CCGCTTTCGG CGATGGTTGG AATGATGCTG CCGAACCCGA CGGTGGTCGT CGACTTCACC GCCAATCAAG TGATCGCCGG GCGCCCGCCG AACACACTAT ACGATGAGAC CTCCTGGCCG GAAGCCGCTT CGACCACTCT CGCCCGGCCG CTGATGAAGG CGGCGCGCGA TGCAATCGAA CACGGCATAA CCAATGCGGC CAACCTGTTT CTCGACGACG GCACGCAACG GTTCAGGATT TCAGCCCGCA TCGAGGCGCT GATGGTCGAC AATCAGTTGG TCGGAGCGCT GATCATCTTC CCCACTTCCC GGCAATTCAG CGATCTTGAC CTACTCATGC TCGACAGCGC CAAATTTGCG CTGAGCGTCC AGATGATGCG CAGCTTCATC CGGTTCCGTT TCGAAACCCG TACTCAATCC GAACTGTTCT TCGAGATCGT CGAAGCCCGA TGGCGGGACG CCGGCGATAT TGCTCAGCGG GCTCAGCGGC TCGGACTGAG CTTCGGCATT CCGCAGCAAA TGATTGTCGT CGATTTCCCC GACAAGACGA AAGCCTTCGG CGGAGCTTCC GTCGATGTCG AGCACACGCT GACGCGCATC CTGCAGCAGA CCTCGTTGCA GGCGAACCTG ATCGCGATCG ATGGCGGTGT CGTCTGCCTC ACGCCCTATG ATACGAGCAA GCGTCAGGAG CGGACGGCAA AGCTCACCCG CCGCATCGCC GAGGAACTCG GCCGCTATTT CGACGAGGCG CCGGTTGTCG TCGCGGGCAA CCGCTGCGAT GCGCTGTCTG ACTACCCGGC GGCCTGGGAA CGGTGCAGCC GCATGATCCG CATCGGCCGC TCCTTCGGAT TGACCGGTGC GATCTCAGCT CAGGACTTCG GGCCGCTTCC GATGTTGGTG GCGGCCTCGG AAGCAGGCGA CGTGCGCAGC TTTGTCCAGG AAAGTGTCGG CGCTATCGCC GATCACGATC GCGAAAACGG CACGCCCTAT ATGGAAACAC TCTCCACCTA TCTGCGGGAG GGGTGCCGCA GCCAGGCTTG CGCCGATACG ATGGGCCTGC ATGTTACGAC GCTGCGCTAC AGGCTGTCGC GCATCCAGGA GCTCTTCGGC GTCGATGTCG AGACTCCGGA AAAGCGCTTT GCCGTCGAAT TGGCGATCCG TCTGCACGGC GTCATCGACA ATCGCTCGAC CGCCCAAAGG TAG
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Protein sequence | MDQRSRVLAL RDVASQINSG GDLQAILQQL IAAACRHADW ALGSIMSIDA AHGYAYVIVR YDPTLIERQL PDKWELATSP SLIALQRNEP VYIPDARESA EFPGYRAEAF ERDYRTVLVL PMNCKDAEGR PMVLSVIARQ ITEVSEDDLA FLGTIIHLGA IAVEREHRLE AEKRSAQRLE KALKAHTSLL EHVLSDGSVA PLSAMVGMML PNPTVVVDFT ANQVIAGRPP NTLYDETSWP EAASTTLARP LMKAARDAIE HGITNAANLF LDDGTQRFRI SARIEALMVD NQLVGALIIF PTSRQFSDLD LLMLDSAKFA LSVQMMRSFI RFRFETRTQS ELFFEIVEAR WRDAGDIAQR AQRLGLSFGI PQQMIVVDFP DKTKAFGGAS VDVEHTLTRI LQQTSLQANL IAIDGGVVCL TPYDTSKRQE RTAKLTRRIA EELGRYFDEA PVVVAGNRCD ALSDYPAAWE RCSRMIRIGR SFGLTGAISA QDFGPLPMLV AASEAGDVRS FVQESVGAIA DHDRENGTPY METLSTYLRE GCRSQACADT MGLHVTTLRY RLSRIQELFG VDVETPEKRF AVELAIRLHG VIDNRSTAQR
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