Gene Rleg2_5494 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRleg2_5494 
Symbol 
ID6978588 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhizobium leguminosarum bv. trifolii WSM2304 
KingdomBacteria 
Replicon accessionNC_011368 
Strand
Start bp1142583 
End bp1143608 
Gene Length1026 bp 
Protein Length341 aa 
Translation table11 
GC content61% 
IMG OID643394593 
ProductABC transporter related 
Protein accessionYP_002279411 
Protein GI209547493 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG3839] ABC-type sugar transport systems, ATPase components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.0266048 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAGAGA TCCGACTGGA AAACATCCGC AAGAGCTTCG GTGCTTTCGA GGTGATCAAG 
GGCGTAACGA TGGACATTCG CAGAGGCGAG TTCATGGTGT TCGTGGGGCC GTCGGGATGC
GGCAAGTCCA CGCTGCTGCG GCTTATCTCC GGCCTGGAGG ACATTACGTC GGGAACCCTC
TCCTTTGACG CCACCACGGT GAACCAGCAC GCGCCATCGA AGCGAGGGAT CGCCATGGTG
TTCCAGTCCT ATGCGCTCTA TCCGCATATG ACGGTCTTCG ACAACATGGC TTTCGGCATG
AAACTGTCCG GGCGCACCAG AGACGAATGC CGCCAGCGTG TTGAAGAGGC GGCCGGTATG
CTGCAGCTCT CACCCTATTT GGATCGCTTG CCGCGCCAGC TTTCTGGCGG ACAGCGTCAG
CGCGTCGCAA TCGGCCGGGC GATCGTCCGC GATCCCAAGG TCTTTCTTTT TGACGAGCCG
CTGTCCAACC TCGATGCGGC GCTTCGCGTC GCGACCAGGC TGGAAATCGC CAAGCTTCAT
CGCAGCATGC ACAACACGAC GATGATCTAT GTGACCCATG ATCAGGTCGA GGCGATGACG
CTGGCCGATC GGATCTGCGT GTTGAGGGAC GGCGTCGTCG AGCAGATCGG CACGCCACTC
GAACTTTACG AAAGCCCCAA TTCGCTCTTC GTTGCCGGCT TCATCGGTTC GCCAAAAATG
AACTTCCTGC AGGGCGGGCT GGCACAGCCC TATGACAGCC ATACAATCGG CGTGCGCGCG
GAGCATGTTC GCATCACGGC CGAGTCGCCG GTTTGGAGCG GCACGGTCAT TCATTCGGAA
ATCCTCGGCT CCGATAGCTT TGTCTATGTG GATATCGGGG CGGATGAGCC GCTCATCGTG
CGGGAGGCCG GTGTCTCTCG TCACGAGCCA GGCCAGACGC TTGGCCTTGC ACCGCTTGCC
GGCCATGTCC ACCGTTTCGA CCGCTCAGGC CGGGCGCTGG AGCGGGCATC CCTGCAGGCT
GCCTGA
 
Protein sequence
MAEIRLENIR KSFGAFEVIK GVTMDIRRGE FMVFVGPSGC GKSTLLRLIS GLEDITSGTL 
SFDATTVNQH APSKRGIAMV FQSYALYPHM TVFDNMAFGM KLSGRTRDEC RQRVEEAAGM
LQLSPYLDRL PRQLSGGQRQ RVAIGRAIVR DPKVFLFDEP LSNLDAALRV ATRLEIAKLH
RSMHNTTMIY VTHDQVEAMT LADRICVLRD GVVEQIGTPL ELYESPNSLF VAGFIGSPKM
NFLQGGLAQP YDSHTIGVRA EHVRITAESP VWSGTVIHSE ILGSDSFVYV DIGADEPLIV
REAGVSRHEP GQTLGLAPLA GHVHRFDRSG RALERASLQA A