| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rleg2_5490 |
|---|
| Symbol | |
|---|
| ID | 6978584 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhizobium leguminosarum bv. trifolii WSM2304 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011368 |
|---|
| Strand | - |
|---|
| Start bp | 1138143 |
|---|
| End bp | 1139156 |
|---|
| Gene Length | 1014 bp |
|---|
| Protein Length | 337 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 643394590 |
|---|
| Product | transcriptional regulator, LacI family |
|---|
| Protein accession | YP_002279408 |
|---|
| Protein GI | 209547490 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1609] Transcriptional regulators |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 0.932078 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 0.122051 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAACTTC GTGAATTTGC AAAGCAGCTT GGGCTTTCTC CGACGACGGT CAGCCGTGCA
CTCAGCGGCT ATCCAGAGGT GAGCGAAGCC ACGCGCGCCC GGGTTGCAAG CGAAGCAAGG
CGGCTTGGCT ATCGCCCCGA TATCAATGCC GTGCGGCTAA AGACCGGACG AGCCGGAGCG
ATAGGCGTGA TGATGGGACG TTCGGGAGAA ATTCATTTCG CTGAATTCGT GTCGGGAATG
GCGCAGCGCC TGGAAACGGC CGATACGGAT ATTCTCATTA CGCCCATCAC CGCACACAAC
GATGACGACG AGATCCAGGC CTATCGACGC CTGGTCGAAA GCCGCCGGGT GGATGCAGTG
ATCATTCATT CGCCACGCCC CCGGGACCCT CGGATCGAGA TGCTGAACAG CCTCGGCGTG
CCTTTCCTGG TTCACGGCCG CTCGGAGACC GAGCACGTTC ACGCCTGGCT CGATATCGAT
AATGAAGGTG CCGTGCGCAG GTCCACCGAA CACCTGCTCG ACCTCGGGCA CCGGCGCATC
GCCATGATCA ACGGCCTCAG GGGCAAGACC TATTCGATCC ATCGCGAGCA GGGTTTTCGG
CTGGCGCATC AAGAGCGCGG GCTGACTGCC GATCCCAACC TGATGGTCTG CGATAAATTC
TCCGACGAAA GCGGCTTTCG CCATGCCCGC TCCTTCCTCG AGAGAGCGAA TGCGCCGACC
GCCATCGTCG CGGGCTCCAC GATGACGGCG CTTGGGGTTT ACCGCGCCGT CCGTTCGCTC
GGAATGACGG TGGGACAGGA TGTTTCGGTC ATCGCCCATG ACGACGTCTT CCCTTATCTG
ACGGCCGAAA ACATGGTGCC GTCGCTCTCG ACAACGCGAT CCTCGATGCG TGCTGCGGGC
ACACGCTGTG CTGAGTTAAC GCTACAGCTT ATCGCCGGAC GTGCCGCGGA TGAGGTCCAT
GAATTGTGGC CGGTCGAACT GATCCTCAGG GAAAGTACCG CCCCACCGCC CTGA
|
|---|
| Protein sequence | MKLREFAKQL GLSPTTVSRA LSGYPEVSEA TRARVASEAR RLGYRPDINA VRLKTGRAGA
IGVMMGRSGE IHFAEFVSGM AQRLETADTD ILITPITAHN DDDEIQAYRR LVESRRVDAV
IIHSPRPRDP RIEMLNSLGV PFLVHGRSET EHVHAWLDID NEGAVRRSTE HLLDLGHRRI
AMINGLRGKT YSIHREQGFR LAHQERGLTA DPNLMVCDKF SDESGFRHAR SFLERANAPT
AIVAGSTMTA LGVYRAVRSL GMTVGQDVSV IAHDDVFPYL TAENMVPSLS TTRSSMRAAG
TRCAELTLQL IAGRAADEVH ELWPVELILR ESTAPPP
|
|---|
| |