Gene Rleg2_5463 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRleg2_5463 
Symbol 
ID6978557 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhizobium leguminosarum bv. trifolii WSM2304 
KingdomBacteria 
Replicon accessionNC_011368 
Strand
Start bp1110098 
End bp1111291 
Gene Length1194 bp 
Protein Length397 aa 
Translation table11 
GC content61% 
IMG OID643394563 
Productplasmid partitioning protein RepA 
Protein accessionYP_002279381 
Protein GI209547463 
COG category[D] Cell cycle control, cell division, chromosome partitioning 
COG ID[COG1192] ATPases involved in chromosome partitioning 
TIGRFAM ID[TIGR03453] plasmid partitioning protein RepA 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.328009 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGCCGA GTCTTGCTCT CCAGGACGAT CAAGAGCATC TCCCCTCGCT TCTGGCAACA 
GATGCGAAGG AGTTGTCCTA TCAACTTCAG CAGCATCAGG CAAAAATCTT CCCGCCGCTG
TCTCAAAAGA CCATCAGAAC ATTTTCGCCG GCGGAAGCTG CGGCTTTCAT CGGCATCGGC
GAAGGTTATC TCCGGCAGGT GGCTGCCGAT GGCCATGGGC CCGATCCGCT GGCAAATGGA
CGGCGGCTCT ATAGCGCAAC GGATATGGAT CGCATTCGCC GGGTCCTCGA CGAGCGAAAC
GGAACGCCGA AATATGTACC GGCCCGCAGG CCGGGAGAAA AGCTCCAGAT CGTCTCCGTC
ATGAATTTCA AGGGCGGTTC GGGCAAGACC ACCACCGCGG CCCATCTGGC GCAGTTTATG
GCGCTGAGGG GCTACCGCGT GCTCGCCGTC GACCTCGATC CGCAGGCTTC CCTGTCCGCG
CTGTTCGGCC ATCAGCCGGA ATTCGACGTC GGCGAGGGCG AAACGATCTA CGGCGCGATC
CGCTATGAGC AGCCGCGCCC CATCGCCGAC ATCGTGCGTG CCACCTACAC GCCCAATCTG
CATCTCATTC CGGGAAATCT CGAGCTGATG GAGTTCGAGC ACGAGACGCC GAAGGCGATG
TCGTCGGGTA GGGCGGAGAC GATGTTCTTT GCCCGCATCG GCGAGGTCCT GACCGAAATC
GAAAGCCTCT ACGACGTCGT GGTCATCGAC TGCCCGCCGC AGCTGGGGTT CCTGACGATG
TCGGCGCTCT GCGCGGCGAC CTCCGTGTTG ATCACGGTTC ATCCGCAGAT GCTCGACGTC
ATGTCGATGT CGCAGTTCCT GACGATGACG AGCGAGCTGA TGTCGGTCGT AGAGAAGGCC
GGCGGACGCA CCAGCTATGA CTGGATGCGC TATCTGGTGA CGCGGTTCGA GCCGAATGAC
GGACCGCAGA GTCAGATGAC CGGCTTCATG CGGGCGATCT TCGGCAATCG AATGCTCCAC
AATGCCATGG TGAAGTCGAC GGCGGTCTCC GATGCCGGCG TTACCAAGCA GACGCTTTAC
GAGGTCGAGC GGTCGCAGTT CACCCGCGGA ACCTATGATC GGGCTCTGGA GTCCCTCAAT
TTGGTGAACA GCGAGATCGA GGCGCATATT CGCTCCACCT GGGGAAGGAA ATAG
 
Protein sequence
MQPSLALQDD QEHLPSLLAT DAKELSYQLQ QHQAKIFPPL SQKTIRTFSP AEAAAFIGIG 
EGYLRQVAAD GHGPDPLANG RRLYSATDMD RIRRVLDERN GTPKYVPARR PGEKLQIVSV
MNFKGGSGKT TTAAHLAQFM ALRGYRVLAV DLDPQASLSA LFGHQPEFDV GEGETIYGAI
RYEQPRPIAD IVRATYTPNL HLIPGNLELM EFEHETPKAM SSGRAETMFF ARIGEVLTEI
ESLYDVVVID CPPQLGFLTM SALCAATSVL ITVHPQMLDV MSMSQFLTMT SELMSVVEKA
GGRTSYDWMR YLVTRFEPND GPQSQMTGFM RAIFGNRMLH NAMVKSTAVS DAGVTKQTLY
EVERSQFTRG TYDRALESLN LVNSEIEAHI RSTWGRK