Gene Rleg2_5458 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRleg2_5458 
Symbol 
ID6978552 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhizobium leguminosarum bv. trifolii WSM2304 
KingdomBacteria 
Replicon accessionNC_011368 
Strand
Start bp1101641 
End bp1102282 
Gene Length642 bp 
Protein Length213 aa 
Translation table11 
GC content61% 
IMG OID643394558 
Producttwo component transcriptional regulator, LuxR family 
Protein accessionYP_002279376 
Protein GI209547458 
COG category[T] Signal transduction mechanisms 
COG ID[COG4566] Response regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.0682828 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.0164406 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGGACA ATGACCATAT TGTCTTCATC GTCGATGACG ACGAACGTGT CCGGGAGGCG 
CTCAGCGAGC TCATGGACGC ACATGGCATG CGCGCCATCG CCTTCGAATC CGCCGGCGAT
TACGTGAGGG CGGACAAGCC TGATGTGCCC GCCTGCCTCA TCCTCGATAT CGAGCTGCCC
GACATCAATG GCCTCGATCT GCAGAGGCAG ATTGCCGACG GGGATCATCC GCCGATCGTC
TTCATTACGG GACACGGCGA CATCCCCTCC TCCGTGCGTG CGATCAAAAG CGGCGCCGTG
GATTTCCTGA CCAAACCGTT CAGTGACGCG GATCTCTTGG CGGCAATCCA TGCAGCGCTC
GCTGAGGATC GGGAAAAGCG ATCGGGACGC GCCGAGCTCG ACATGCTCAA ACGACACTAT
CTCGACCTGA CGCCGCGCGA GCGCGAAGTG CTGCCGCTCG TGGTCAGCGG TCTTCTCAAC
AAGCAGGCGG CCGCGGAACT CGGAATCAGC GAAGTCACGC TGCAGATCCA CAGAAGAAAC
GTGATGCAGA AAATGGCGGC CGCGTCGCTC GCCGATCTCG TGCGGATTGC GGAGAAGCTG
GAAATACCGA TTACCCACTC GCGCCGGGTG GGGGGGAATT GA
 
Protein sequence
MTDNDHIVFI VDDDERVREA LSELMDAHGM RAIAFESAGD YVRADKPDVP ACLILDIELP 
DINGLDLQRQ IADGDHPPIV FITGHGDIPS SVRAIKSGAV DFLTKPFSDA DLLAAIHAAL
AEDREKRSGR AELDMLKRHY LDLTPREREV LPLVVSGLLN KQAAAELGIS EVTLQIHRRN
VMQKMAAASL ADLVRIAEKL EIPITHSRRV GGN