Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rleg2_5458 |
Symbol | |
ID | 6978552 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhizobium leguminosarum bv. trifolii WSM2304 |
Kingdom | Bacteria |
Replicon accession | NC_011368 |
Strand | - |
Start bp | 1101641 |
End bp | 1102282 |
Gene Length | 642 bp |
Protein Length | 213 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 643394558 |
Product | two component transcriptional regulator, LuxR family |
Protein accession | YP_002279376 |
Protein GI | 209547458 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG4566] Response regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.0682828 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.0164406 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACGGACA ATGACCATAT TGTCTTCATC GTCGATGACG ACGAACGTGT CCGGGAGGCG CTCAGCGAGC TCATGGACGC ACATGGCATG CGCGCCATCG CCTTCGAATC CGCCGGCGAT TACGTGAGGG CGGACAAGCC TGATGTGCCC GCCTGCCTCA TCCTCGATAT CGAGCTGCCC GACATCAATG GCCTCGATCT GCAGAGGCAG ATTGCCGACG GGGATCATCC GCCGATCGTC TTCATTACGG GACACGGCGA CATCCCCTCC TCCGTGCGTG CGATCAAAAG CGGCGCCGTG GATTTCCTGA CCAAACCGTT CAGTGACGCG GATCTCTTGG CGGCAATCCA TGCAGCGCTC GCTGAGGATC GGGAAAAGCG ATCGGGACGC GCCGAGCTCG ACATGCTCAA ACGACACTAT CTCGACCTGA CGCCGCGCGA GCGCGAAGTG CTGCCGCTCG TGGTCAGCGG TCTTCTCAAC AAGCAGGCGG CCGCGGAACT CGGAATCAGC GAAGTCACGC TGCAGATCCA CAGAAGAAAC GTGATGCAGA AAATGGCGGC CGCGTCGCTC GCCGATCTCG TGCGGATTGC GGAGAAGCTG GAAATACCGA TTACCCACTC GCGCCGGGTG GGGGGGAATT GA
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Protein sequence | MTDNDHIVFI VDDDERVREA LSELMDAHGM RAIAFESAGD YVRADKPDVP ACLILDIELP DINGLDLQRQ IADGDHPPIV FITGHGDIPS SVRAIKSGAV DFLTKPFSDA DLLAAIHAAL AEDREKRSGR AELDMLKRHY LDLTPREREV LPLVVSGLLN KQAAAELGIS EVTLQIHRRN VMQKMAAASL ADLVRIAEKL EIPITHSRRV GGN
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