| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rleg2_5445 |
|---|
| Symbol | |
|---|
| ID | 6978539 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhizobium leguminosarum bv. trifolii WSM2304 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011368 |
|---|
| Strand | - |
|---|
| Start bp | 1088213 |
|---|
| End bp | 1089043 |
|---|
| Gene Length | 831 bp |
|---|
| Protein Length | 276 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 643394546 |
|---|
| Product | NAD-dependent epimerase/dehydratase |
|---|
| Protein accession | YP_002279364 |
|---|
| Protein GI | 209547446 |
|---|
| COG category | [G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0451] Nucleoside-diphosphate-sugar epimerases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 29 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
|---|
| Fosmid unclonability p-value | 0.00620195 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGAAACGGA TCGCTTTGAC GGGGGCTACT GGGCGTGTCG GAACGCTGCT GCGCCCGCTG
CTGCGCGCAC ATTTCGGGCA CGTCAGCCTG ATCGATCTGC AGGAGCCTGC CGGGCTTTGC
GACAACGAGA CCTTTGTCAG GGCCGATCTC ACAAAGCTCG ACGAGGCTAC AGCTGCGCTG
AAGGATATCG ACGGCGTCGT TCATCTCGCG GGTATCGCAA GCGGCACCGA CATGAACGCC
ATTCTGCACG CCAATGTGCT TGGAACCTGC AATCTCTACG AAGCGGCGCG GATCAACAAG
GTCGAGCGGG TCGTCTACGC ATCGAGCAAC CATGCGACCG GCTTCTATCC GCGCGGCGAA
ATCATATCGC CGCTCGATCC GATGCGTCCC GACAGCCCCT ATGGACTTTC CAAATGCTGG
GGCGAACTGG TGGCGGGGCT TTACTACGAC ACGTCGGGCA TTCGCTCTCT TTCCATCCGC
ATCGGCAATG CCGGCACCTA TCCCAACAGC GAGCGATCGA TTGCGATCTG GATCAGCGCG
CGGGATCTGG CGCAATTGGT GCGGATTGGG CTGTCCCACC CGTCGATCGC CGCGACGGTC
GTCTACGGCG TTTCCGATAC CGACGAGAAA TGGTGGGACA ATGATCTGGC GACAAGGCTC
GGCTACCGGC CCGAGGACCG GCCGCGCGAT CACGCCCGCA TCGAACAGGG ATCCGAAGGA
CCGGTCGCAT TGGCGTTTCA GGGTGGCGGG TTCTGCGAGA TCAATCACGA CGGCACCATC
CGCATGCGTG ATGCAGAAGG TTTGGCCAAG AGCCTGGAGG CGGCCGAATG A
|
|---|
| Protein sequence | MKRIALTGAT GRVGTLLRPL LRAHFGHVSL IDLQEPAGLC DNETFVRADL TKLDEATAAL
KDIDGVVHLA GIASGTDMNA ILHANVLGTC NLYEAARINK VERVVYASSN HATGFYPRGE
IISPLDPMRP DSPYGLSKCW GELVAGLYYD TSGIRSLSIR IGNAGTYPNS ERSIAIWISA
RDLAQLVRIG LSHPSIAATV VYGVSDTDEK WWDNDLATRL GYRPEDRPRD HARIEQGSEG
PVALAFQGGG FCEINHDGTI RMRDAEGLAK SLEAAE
|
|---|
| |