Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rleg2_5444 |
Symbol | |
ID | 6978538 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhizobium leguminosarum bv. trifolii WSM2304 |
Kingdom | Bacteria |
Replicon accession | NC_011368 |
Strand | - |
Start bp | 1087329 |
End bp | 1088216 |
Gene Length | 888 bp |
Protein Length | 295 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 643394545 |
Product | SMP-30/Gluconolaconase/LRE domain protein |
Protein accession | YP_002279363 |
Protein GI | 209547445 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG3386] Gluconolactonase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.00675978 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGAGGGCGC CTCGGATCAT CCGCCCGCAA ATCAGATCCG TGATCCAGCA GCCGCTGACG GTCGGTGAAT CGCCGGTATG GGACGATGAG ACCGGCACGC TGTGGCTCGT CGATATCCTG GCGCCGGCGG TTGTCCGTGT CTCCCCGCAA GAAAAGATCG ACCGCTTCGA CATGCCGGCT GCGATCGGCA GCCTCGGGCT TTGCCGCGAT CACAGGATCG TCGTCGGCCT GCAGACGGGC GTCCATCTCT TCGATCCTGT CTCGGGAAAA ATCGAGTTTC TGTGCGATCC GGTCGGGCGC GATATCAATG GTCGCCTGAA CGACGGCAAG GTCGGCCCCG ACGGGCACTT CTGGGTCGGC TCGATCAGCG AAGCCAAGCC GCAGGTCAAT GACGCAGCGC TTTTCCGCGT CGGGGCCGAT GGCAGCACGC GCACCGTCGC AACCGGGCTG ACGAGCTCCA ACGGTCTCGC CTGGTCGCCG GACGGCCAGC GGATGTACCA CTCCGACAGC CGGCAATGTT TCCTGCAGGC ATTCGACTTC GATCCCGAGA CGGGCAGTCT CGGCGAAGGA CGCCGCCTTC GCAGCTTCAC CGAAGATGAG GGACGGCCGG ACGGGGCGAC AACAGATCGC GACGGGTTTT ACTGGAGCGC CGGCGTCTCC GCCGGCCGCC TCAACCGCAT ATCGAGCGAA GGCGAAATCG TCGAGATCTA CATTCTGCCG GTCCCGGCAC CGACCATGCC GTGTTTCGGA GGGCCTGATC TCAGCACCCT CTTCGTCACC AGCCTGTCGA CGGACCGCAC CGGGCAGTTC GAGGCGGGCA CGGTCATCGC CTTCGACGTG GATGCAGAGG GGCTGCCGCC CTTCCGCTTC GGCAACCAAT CATCTTGA
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Protein sequence | MRAPRIIRPQ IRSVIQQPLT VGESPVWDDE TGTLWLVDIL APAVVRVSPQ EKIDRFDMPA AIGSLGLCRD HRIVVGLQTG VHLFDPVSGK IEFLCDPVGR DINGRLNDGK VGPDGHFWVG SISEAKPQVN DAALFRVGAD GSTRTVATGL TSSNGLAWSP DGQRMYHSDS RQCFLQAFDF DPETGSLGEG RRLRSFTEDE GRPDGATTDR DGFYWSAGVS AGRLNRISSE GEIVEIYILP VPAPTMPCFG GPDLSTLFVT SLSTDRTGQF EAGTVIAFDV DAEGLPPFRF GNQSS
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