Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rleg2_5439 |
Symbol | |
ID | 6978533 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhizobium leguminosarum bv. trifolii WSM2304 |
Kingdom | Bacteria |
Replicon accession | NC_011368 |
Strand | - |
Start bp | 1081834 |
End bp | 1082691 |
Gene Length | 858 bp |
Protein Length | 285 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 643394540 |
Product | ABC transporter related |
Protein accession | YP_002279358 |
Protein GI | 209547440 |
COG category | [E] Amino acid transport and metabolism [P] Inorganic ion transport and metabolism |
COG ID | [COG0444] ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 0.476246 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.0038839 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGACAGAGC CCCTGATCGA CATTCACAAC CTCGAAATCG CCTATGGCGG CGGCCAGATG CGCGCGGTGC GCGGCGTGAG TTTTGCGCTC GGACAGGAAA AACTCGGCAT CGTCGGCGAG TCCGGATCCG GCAAATCCAC CGTCGGCCGG GCGATCATGA AGCTGCTGCC GCCGACCGCG ATCGTTCGTG CCGAGCGGAT GGCCTTTCGC GACGTCGACC TTCTCAAGGC TGATGAACGA AAGATGATGA CGATCCGAGG GCGGCGGATC GGTCTGATCC TGCAGGACCC GAAATATTCG CTCAATCCTG TCATGCGGAT CGGTGAACAG ATCGCCGAGA CCTACCGTTT CCATCATCCG AAGGCGGGCG CGAAGCAGAC CTACCAACAG GCGCTCGACA TGCTCGAAGC CGTCCAGATC CGCGATCCCG AGCGCGTCGC CCGTCTTTAT CCCCACGAAA TATCGGGCGG GATGGGCCAG CGCGTGATGA TCGCCATGAT GCTGATCGCC GAACCCGAAG TGCTGATCGC CGACGAGCCG ACCTCGGCGC TCGACGTCAC GGTCAGGCTC GAAATCCTGG CGCTGCTCGA CGAACTCGTT TCACGCCGCA ATCTCGGACT GATCTTCATC AGCCACGATC TCAACCTGAT CCGGAATTTC TGCGACCGCG TCCTCATCAT GTATGCCGGC CGTGTCGTGG AAGTGCTGGA AGCGCGCGAT CTCGACAGGG CGAAACACCC TTATACGCAG GGGCTGCTGG CATCCCTGCC GACGATCGAC AATCCCCCTG CCCGGCTGCC GATCCTGAAA CGCGACCCGG TCTGGCTTGA CGACCTCGCA GCGGAGGTGC GGCTATGA
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Protein sequence | MTEPLIDIHN LEIAYGGGQM RAVRGVSFAL GQEKLGIVGE SGSGKSTVGR AIMKLLPPTA IVRAERMAFR DVDLLKADER KMMTIRGRRI GLILQDPKYS LNPVMRIGEQ IAETYRFHHP KAGAKQTYQQ ALDMLEAVQI RDPERVARLY PHEISGGMGQ RVMIAMMLIA EPEVLIADEP TSALDVTVRL EILALLDELV SRRNLGLIFI SHDLNLIRNF CDRVLIMYAG RVVEVLEARD LDRAKHPYTQ GLLASLPTID NPPARLPILK RDPVWLDDLA AEVRL
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