Gene Rleg2_5439 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRleg2_5439 
Symbol 
ID6978533 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhizobium leguminosarum bv. trifolii WSM2304 
KingdomBacteria 
Replicon accessionNC_011368 
Strand
Start bp1081834 
End bp1082691 
Gene Length858 bp 
Protein Length285 aa 
Translation table11 
GC content62% 
IMG OID643394540 
ProductABC transporter related 
Protein accessionYP_002279358 
Protein GI209547440 
COG category[E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism 
COG ID[COG0444] ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.476246 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.0038839 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGACAGAGC CCCTGATCGA CATTCACAAC CTCGAAATCG CCTATGGCGG CGGCCAGATG 
CGCGCGGTGC GCGGCGTGAG TTTTGCGCTC GGACAGGAAA AACTCGGCAT CGTCGGCGAG
TCCGGATCCG GCAAATCCAC CGTCGGCCGG GCGATCATGA AGCTGCTGCC GCCGACCGCG
ATCGTTCGTG CCGAGCGGAT GGCCTTTCGC GACGTCGACC TTCTCAAGGC TGATGAACGA
AAGATGATGA CGATCCGAGG GCGGCGGATC GGTCTGATCC TGCAGGACCC GAAATATTCG
CTCAATCCTG TCATGCGGAT CGGTGAACAG ATCGCCGAGA CCTACCGTTT CCATCATCCG
AAGGCGGGCG CGAAGCAGAC CTACCAACAG GCGCTCGACA TGCTCGAAGC CGTCCAGATC
CGCGATCCCG AGCGCGTCGC CCGTCTTTAT CCCCACGAAA TATCGGGCGG GATGGGCCAG
CGCGTGATGA TCGCCATGAT GCTGATCGCC GAACCCGAAG TGCTGATCGC CGACGAGCCG
ACCTCGGCGC TCGACGTCAC GGTCAGGCTC GAAATCCTGG CGCTGCTCGA CGAACTCGTT
TCACGCCGCA ATCTCGGACT GATCTTCATC AGCCACGATC TCAACCTGAT CCGGAATTTC
TGCGACCGCG TCCTCATCAT GTATGCCGGC CGTGTCGTGG AAGTGCTGGA AGCGCGCGAT
CTCGACAGGG CGAAACACCC TTATACGCAG GGGCTGCTGG CATCCCTGCC GACGATCGAC
AATCCCCCTG CCCGGCTGCC GATCCTGAAA CGCGACCCGG TCTGGCTTGA CGACCTCGCA
GCGGAGGTGC GGCTATGA
 
Protein sequence
MTEPLIDIHN LEIAYGGGQM RAVRGVSFAL GQEKLGIVGE SGSGKSTVGR AIMKLLPPTA 
IVRAERMAFR DVDLLKADER KMMTIRGRRI GLILQDPKYS LNPVMRIGEQ IAETYRFHHP
KAGAKQTYQQ ALDMLEAVQI RDPERVARLY PHEISGGMGQ RVMIAMMLIA EPEVLIADEP
TSALDVTVRL EILALLDELV SRRNLGLIFI SHDLNLIRNF CDRVLIMYAG RVVEVLEARD
LDRAKHPYTQ GLLASLPTID NPPARLPILK RDPVWLDDLA AEVRL