Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rleg2_5438 |
Symbol | |
ID | 6978532 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhizobium leguminosarum bv. trifolii WSM2304 |
Kingdom | Bacteria |
Replicon accession | NC_011368 |
Strand | - |
Start bp | 1081094 |
End bp | 1081837 |
Gene Length | 744 bp |
Protein Length | 247 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 643394539 |
Product | ABC transporter related |
Protein accession | YP_002279357 |
Protein GI | 209547439 |
COG category | [E] Amino acid transport and metabolism [P] Inorganic ion transport and metabolism |
COG ID | [COG1124] ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 0.62538 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.00360775 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGATCCGGA TCGACAATCT CACCATCCGT TTCGGACACG GCCAGCGGCC CGTTGTCAGA GATGTGAACC TCACGGTCGA GAGGGGGACG GCGTTCGGCC TGGTCGGCGA ATCCGGCTGC GGCAAGTCCA CGGTTCTCAG GGCCCTCTCC GGCCTCAATG CCAATTATGA TGGTAACATC GGCCTCCAGG GCGAGACGCT GGACCGGCAG CGCAGCCGGC CGTTCTATCG CCGGGTGCAG ATGGTGTTTC AGGACCCCTA CGGATCGCTC CATCCCCGCA AGACCATCCG CTCGCAACTG AAGGAACCGC TACGCAATCA GGGGCTGGAG ACGAATTCCG TCGACATCAA CGCCGTCCTC AGATCGGTCG GCCTCGATCC GGCGCTGAGC TACAGATTTC CGCATCAGCT CTCCGGCGGG CAGCGCCAGC GTGTGGCGAT CGCCCGAGCC CTGATGCTGA ACCCTGATGT TCTACTTCTC GACGAACCGA CATCGGCGCT CGATGTCTCT GTCCAGGCCG AGATCCTCAA TCTGCTGCAG GATCTGCGCG CCGAGCGCGG CCTCACCTAT CTCCTCGTCA GCCACGACCT CGCCGTCGTC TCCCACATGT GCAGCCGAGT CGCCATCATG GAAGCCGGCG AGATCGTCGA ACAGGTCGAT ATCGAGGCTC TGCGTCGAGG CGCCGTCGAA CATCCCTATT CGCAACGCTT GCTGCGGGCG AGCCGAATGT ATGGAAGGGC GTAG
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Protein sequence | MIRIDNLTIR FGHGQRPVVR DVNLTVERGT AFGLVGESGC GKSTVLRALS GLNANYDGNI GLQGETLDRQ RSRPFYRRVQ MVFQDPYGSL HPRKTIRSQL KEPLRNQGLE TNSVDINAVL RSVGLDPALS YRFPHQLSGG QRQRVAIARA LMLNPDVLLL DEPTSALDVS VQAEILNLLQ DLRAERGLTY LLVSHDLAVV SHMCSRVAIM EAGEIVEQVD IEALRRGAVE HPYSQRLLRA SRMYGRA
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