Gene Rleg2_5438 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRleg2_5438 
Symbol 
ID6978532 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhizobium leguminosarum bv. trifolii WSM2304 
KingdomBacteria 
Replicon accessionNC_011368 
Strand
Start bp1081094 
End bp1081837 
Gene Length744 bp 
Protein Length247 aa 
Translation table11 
GC content63% 
IMG OID643394539 
ProductABC transporter related 
Protein accessionYP_002279357 
Protein GI209547439 
COG category[E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism 
COG ID[COG1124] ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value0.62538 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.00360775 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGATCCGGA TCGACAATCT CACCATCCGT TTCGGACACG GCCAGCGGCC CGTTGTCAGA 
GATGTGAACC TCACGGTCGA GAGGGGGACG GCGTTCGGCC TGGTCGGCGA ATCCGGCTGC
GGCAAGTCCA CGGTTCTCAG GGCCCTCTCC GGCCTCAATG CCAATTATGA TGGTAACATC
GGCCTCCAGG GCGAGACGCT GGACCGGCAG CGCAGCCGGC CGTTCTATCG CCGGGTGCAG
ATGGTGTTTC AGGACCCCTA CGGATCGCTC CATCCCCGCA AGACCATCCG CTCGCAACTG
AAGGAACCGC TACGCAATCA GGGGCTGGAG ACGAATTCCG TCGACATCAA CGCCGTCCTC
AGATCGGTCG GCCTCGATCC GGCGCTGAGC TACAGATTTC CGCATCAGCT CTCCGGCGGG
CAGCGCCAGC GTGTGGCGAT CGCCCGAGCC CTGATGCTGA ACCCTGATGT TCTACTTCTC
GACGAACCGA CATCGGCGCT CGATGTCTCT GTCCAGGCCG AGATCCTCAA TCTGCTGCAG
GATCTGCGCG CCGAGCGCGG CCTCACCTAT CTCCTCGTCA GCCACGACCT CGCCGTCGTC
TCCCACATGT GCAGCCGAGT CGCCATCATG GAAGCCGGCG AGATCGTCGA ACAGGTCGAT
ATCGAGGCTC TGCGTCGAGG CGCCGTCGAA CATCCCTATT CGCAACGCTT GCTGCGGGCG
AGCCGAATGT ATGGAAGGGC GTAG
 
Protein sequence
MIRIDNLTIR FGHGQRPVVR DVNLTVERGT AFGLVGESGC GKSTVLRALS GLNANYDGNI 
GLQGETLDRQ RSRPFYRRVQ MVFQDPYGSL HPRKTIRSQL KEPLRNQGLE TNSVDINAVL
RSVGLDPALS YRFPHQLSGG QRQRVAIARA LMLNPDVLLL DEPTSALDVS VQAEILNLLQ
DLRAERGLTY LLVSHDLAVV SHMCSRVAIM EAGEIVEQVD IEALRRGAVE HPYSQRLLRA
SRMYGRA