Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rleg2_5423 |
Symbol | |
ID | 6978517 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhizobium leguminosarum bv. trifolii WSM2304 |
Kingdom | Bacteria |
Replicon accession | NC_011368 |
Strand | - |
Start bp | 1066011 |
End bp | 1066739 |
Gene Length | 729 bp |
Protein Length | 242 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 643394525 |
Product | Endonuclease/exonuclease/phosphatase |
Protein accession | YP_002279343 |
Protein GI | 209547425 |
COG category | [R] General function prediction only |
COG ID | [COG3568] Metal-dependent hydrolase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 0.313531 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.0062358 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGGCGGAAA AATCAATCAG ACTCCTGACT TACAACGTGC ACAGCTGTAT CGGTAGCGAC CGTAAGCTCG ATCCCGGGCG CATCGCTTCG GTCATCGCCG AGGCACAAGC CGACATCGTC GCGCTTCAGG AGGTCGATGT CCTCAGGCGC CGGACTGGCG GCATCGACCA GGCCCATATG ATCGCCTCAC TTCTCGAGAT GCAGGCCCAT TTTCACCCAG CGCTGTCGGT CGCCGAAGAG CAGTATGGCG ATGCGATCAT CACCGCTCTG CCGACGGGCG CGGTCAAGGC CGGCCCGCTG CCATCCATCG GCGAACAGCG CGGCGCCATT TCCGTCGAAA TCCTGGTCGG CGACAGAAAA CTGCTGGTCG TCAACACCCA TCTGGGCCTT CGCGGCCGCG AGCGCATGCG GCAGATGACG ACGCTCTTGA ACGCGGGCTG GCTGCGCGGC ACGGCGGACG AACCGCTTCC CACTATTCTC TGTGGCGACT TCAACGCCAT TCCGTCGTCG GCGACGTACC GACTTGCCGC GCGATCGCTG AAGGACGCCC AGCGCGCAGG CAATGCGCGG CCGAGAGCGA CCTTTCCCGC CCGCTACCCG CTGATGCGTC TCGACCACGT CTTCGTCACC GACGACCTCA TCGTCAAGCA GGCGACGGTT CTGGAAAACC GCCTGGCAAG GGTCGCCTCC GACCACCTTC CTCTGCTCGC GGAAATTGCC TTCGCGTAA
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Protein sequence | MAEKSIRLLT YNVHSCIGSD RKLDPGRIAS VIAEAQADIV ALQEVDVLRR RTGGIDQAHM IASLLEMQAH FHPALSVAEE QYGDAIITAL PTGAVKAGPL PSIGEQRGAI SVEILVGDRK LLVVNTHLGL RGRERMRQMT TLLNAGWLRG TADEPLPTIL CGDFNAIPSS ATYRLAARSL KDAQRAGNAR PRATFPARYP LMRLDHVFVT DDLIVKQATV LENRLARVAS DHLPLLAEIA FA
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