Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rleg2_5406 |
Symbol | |
ID | 6978500 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhizobium leguminosarum bv. trifolii WSM2304 |
Kingdom | Bacteria |
Replicon accession | NC_011368 |
Strand | - |
Start bp | 1049160 |
End bp | 1049879 |
Gene Length | 720 bp |
Protein Length | 239 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 643394508 |
Product | transcriptional regulator, GntR family |
Protein accession | YP_002279326 |
Protein GI | 209547408 |
COG category | [K] Transcription |
COG ID | [COG1802] Transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 0.723673 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.00193724 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGAATTCCC AGTTCGCTTC CACATTCGGC CTGACTGCCC CCGGCTTTCC AGCCGCGGCC GGCAGCACGG TCCAGCGCGT CTATGATGAT CTCAGAAAGC GCATCATCAC CATTCAGCTG CCCCCGGACA CCACGCTGTC GCGCACCGAG CTTACCGAGA CCTATGAAGT CAGCCAGACT CCCATTCGCG ACGCGCTGCA GCTTCTCAAA CAGGAAGGTC TGGTGCGGAT TTATCCGCAG TCCCGCACTG TCGTAACCAG GATCGACGTC CTGCAAATTT ACGAGGCGCA TTTCCTCCGC GTCGCGCTGG AATCGGAAGT CTGCCGCCGT CTCGCGACCG ATCCTGATCC GGATCCGAGC GTCATCACGC GCGCCCGCTC GATCATCAAA ATGCAGTCGG CCGTCGCCGA CGACATCGAC CAGGTTGCTA TATTCCAGGA GCTCGACGAA CTCTTTCACC AGACATTGTT CGCAGGCGCC AAGCGCAGCA GCCTGCATCA ACTGGTTCGC GAGCGGTCCG GCCATCTCGA ACGCATTCGC CGTCTGCATC TGCCCGAAAA GGGCAAGATC ACGAGCATTC TCGAGGGTCA TCACGCCATC ATCGACGCGA TTGCCGCCCG CGACGAACAG GGTGCCGTCG ATGCGATCCG CGAGCATCTC AGCCGCACAG TCGCAAAAGT CGAAGACCTC AGGAAGGAGT TCCCGGACTA CTTCGTCTGA
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Protein sequence | MNSQFASTFG LTAPGFPAAA GSTVQRVYDD LRKRIITIQL PPDTTLSRTE LTETYEVSQT PIRDALQLLK QEGLVRIYPQ SRTVVTRIDV LQIYEAHFLR VALESEVCRR LATDPDPDPS VITRARSIIK MQSAVADDID QVAIFQELDE LFHQTLFAGA KRSSLHQLVR ERSGHLERIR RLHLPEKGKI TSILEGHHAI IDAIAARDEQ GAVDAIREHL SRTVAKVEDL RKEFPDYFV
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