Gene Rleg2_5406 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRleg2_5406 
Symbol 
ID6978500 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhizobium leguminosarum bv. trifolii WSM2304 
KingdomBacteria 
Replicon accessionNC_011368 
Strand
Start bp1049160 
End bp1049879 
Gene Length720 bp 
Protein Length239 aa 
Translation table11 
GC content60% 
IMG OID643394508 
Producttranscriptional regulator, GntR family 
Protein accessionYP_002279326 
Protein GI209547408 
COG category[K] Transcription 
COG ID[COG1802] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value0.723673 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.00193724 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAATTCCC AGTTCGCTTC CACATTCGGC CTGACTGCCC CCGGCTTTCC AGCCGCGGCC 
GGCAGCACGG TCCAGCGCGT CTATGATGAT CTCAGAAAGC GCATCATCAC CATTCAGCTG
CCCCCGGACA CCACGCTGTC GCGCACCGAG CTTACCGAGA CCTATGAAGT CAGCCAGACT
CCCATTCGCG ACGCGCTGCA GCTTCTCAAA CAGGAAGGTC TGGTGCGGAT TTATCCGCAG
TCCCGCACTG TCGTAACCAG GATCGACGTC CTGCAAATTT ACGAGGCGCA TTTCCTCCGC
GTCGCGCTGG AATCGGAAGT CTGCCGCCGT CTCGCGACCG ATCCTGATCC GGATCCGAGC
GTCATCACGC GCGCCCGCTC GATCATCAAA ATGCAGTCGG CCGTCGCCGA CGACATCGAC
CAGGTTGCTA TATTCCAGGA GCTCGACGAA CTCTTTCACC AGACATTGTT CGCAGGCGCC
AAGCGCAGCA GCCTGCATCA ACTGGTTCGC GAGCGGTCCG GCCATCTCGA ACGCATTCGC
CGTCTGCATC TGCCCGAAAA GGGCAAGATC ACGAGCATTC TCGAGGGTCA TCACGCCATC
ATCGACGCGA TTGCCGCCCG CGACGAACAG GGTGCCGTCG ATGCGATCCG CGAGCATCTC
AGCCGCACAG TCGCAAAAGT CGAAGACCTC AGGAAGGAGT TCCCGGACTA CTTCGTCTGA
 
Protein sequence
MNSQFASTFG LTAPGFPAAA GSTVQRVYDD LRKRIITIQL PPDTTLSRTE LTETYEVSQT 
PIRDALQLLK QEGLVRIYPQ SRTVVTRIDV LQIYEAHFLR VALESEVCRR LATDPDPDPS
VITRARSIIK MQSAVADDID QVAIFQELDE LFHQTLFAGA KRSSLHQLVR ERSGHLERIR
RLHLPEKGKI TSILEGHHAI IDAIAARDEQ GAVDAIREHL SRTVAKVEDL RKEFPDYFV