Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rleg2_5403 |
Symbol | |
ID | 6978497 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhizobium leguminosarum bv. trifolii WSM2304 |
Kingdom | Bacteria |
Replicon accession | NC_011368 |
Strand | + |
Start bp | 1045624 |
End bp | 1046559 |
Gene Length | 936 bp |
Protein Length | 311 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 643394505 |
Product | binding-protein-dependent transport systems inner membrane component |
Protein accession | YP_002279323 |
Protein GI | 209547405 |
COG category | [E] Amino acid transport and metabolism [P] Inorganic ion transport and metabolism |
COG ID | [COG1173] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.0483162 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.00242915 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
| |
Sequence |
Gene sequence | ATGACCGACA CACAAATCCT CGTCGAGAAA AAACCGAGCG GCCCGATCGG GCGCTGGCTG ACCATGCTGT GGACGGACAA GCTGGCTTTC TTTGCCGCTC TATTCCTGCT GATCGTTCTT CTCTGTGCGC TGTTCGGCCC GTTTCTGCTG GAGGGCATCG CCACCAAGCA GAACCTGCGG GGCCGAAACG CGCCGCCCTT CGATATCACC CGCGGATGGC TTTACGTCCT TGGCGCCGAT GCGCTGGGCA GGCCGCTTCT GGCCCGCGTC GTCGTGGCGG CGCAAAACAC CATGCTGGTC GCCGCGGCGG CGGTGCTTGC ATCCTCTGTC GTCGGCACGG CGCTCGGTCT GGTGGCTGGT TACAGCCGCT CGTCCGCCGC TCAATGGATC ATGCGCCTCG GCGACGTCAT CATGTCCTTT CCGTCGCTGC TTTTGGCAGT GATCGTGCTC TATATGCTCG AACCCTCGGT CACCAATATC GTCCTCGTCC TGGCGATTAC CCGGATACCC ATCTATCTGC GAACCGCTCG CGCCGAAGTG CTGGAGGTGC GCGAGCGGAT GTTCGTGCAG GCGGCGAAGG TCATGGGGGC ATCGGACCGG CGCATCGTCT TCCAACACAT CCTGCCGGTC ATCTTTCCAA CGCTGGTGAC CATCGCGACG CTTGATTTCG CATTCGTCAT GCTGGCGGAA TCCTCGCTGT CGTTCCTGGG GATCGGCATT CAGGCGCCTG AGATCACCTG GGGTCTCATG GTTGCTCAAG GGCGGCCCTA TCTCACCAAT GCCTGGTGGC TATCCTTCTG GCCCGGCCTT GCAATCATCC TGACGACGCT GTCGCTCAAT CTTCTGTCGA ACTGGCTGCG CATCGCGCTC GATCCGACGC AACGCTGGCG GCTTGAAATG AGAGGCCGGG AAATGAGAGG CAAGAAAAAT GGCTGA
|
Protein sequence | MTDTQILVEK KPSGPIGRWL TMLWTDKLAF FAALFLLIVL LCALFGPFLL EGIATKQNLR GRNAPPFDIT RGWLYVLGAD ALGRPLLARV VVAAQNTMLV AAAAVLASSV VGTALGLVAG YSRSSAAQWI MRLGDVIMSF PSLLLAVIVL YMLEPSVTNI VLVLAITRIP IYLRTARAEV LEVRERMFVQ AAKVMGASDR RIVFQHILPV IFPTLVTIAT LDFAFVMLAE SSLSFLGIGI QAPEITWGLM VAQGRPYLTN AWWLSFWPGL AIILTTLSLN LLSNWLRIAL DPTQRWRLEM RGREMRGKKN G
|
| |