Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rleg2_5366 |
Symbol | |
ID | 6978460 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhizobium leguminosarum bv. trifolii WSM2304 |
Kingdom | Bacteria |
Replicon accession | NC_011368 |
Strand | - |
Start bp | 996192 |
End bp | 996824 |
Gene Length | 633 bp |
Protein Length | 210 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 643394468 |
Product | transcriptional regulator, TetR family |
Protein accession | YP_002279286 |
Protein GI | 209547368 |
COG category | [K] Transcription |
COG ID | [COG1309] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.00158369 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 0.823764 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCAGCTC AGAAGAAGCT CACACGCGCG GAACAGAAGG CGCTGCGGCC CATCCAAATT CTGGATGCCG CCTTCGAGGA ATTCGTCAAA TGCGGCTTTT CCGGAACACG CGTCGAAGAT ATCGCCGACA GGGTCGGCGT CACCAAAGGC ACGGTCTACG TCTACTTCGA AACCAAGGAA AAGCTTTTCG AAGCAATGAT CAACCACTTC TCCGTGCCGT TTCAGGAACT GGTCGCGATC GCCGATCGGC TGAGCGGCAG CGCTACCGAC AGGTTGATGT CCATTCTCGG TCTCTTCTAC GAGCAAATTC CCGAGGACCG CGCGACGCGG GAATTGACGC GGCTGGTCAT TTCGGAGGGA CAGCGTTTCC CCGACCTGAT CGATCGCCAC CACGATCAGT TCATTGCGCC TGTTATCGCC AAGATCGACG CCCTCATCCT GGAGGGCGTG GCCTCGGGCG AGTTTCGTCC AATTCCGGTG GAATTTTCCG ACATCGTGGT CGCGCCCATC CTGACGACCA CGGTTCTGCG GTTGATCTTC GACGACCGCC GCGTGCCCAC TCCCAACAAG GAGGCCTTCC TGCGGACCTA TTTCGACCTG CTGTTCAACG GCCTGCTCGC CAAGCCTCAC TGA
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Protein sequence | MAAQKKLTRA EQKALRPIQI LDAAFEEFVK CGFSGTRVED IADRVGVTKG TVYVYFETKE KLFEAMINHF SVPFQELVAI ADRLSGSATD RLMSILGLFY EQIPEDRATR ELTRLVISEG QRFPDLIDRH HDQFIAPVIA KIDALILEGV ASGEFRPIPV EFSDIVVAPI LTTTVLRLIF DDRRVPTPNK EAFLRTYFDL LFNGLLAKPH
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