Gene Rleg2_5362 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRleg2_5362 
Symbol 
ID6978456 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhizobium leguminosarum bv. trifolii WSM2304 
KingdomBacteria 
Replicon accessionNC_011368 
Strand
Start bp991257 
End bp992315 
Gene Length1059 bp 
Protein Length352 aa 
Translation table11 
GC content61% 
IMG OID643394464 
Productbinding-protein-dependent transport systems inner membrane component 
Protein accessionYP_002279282 
Protein GI209547364 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0395] ABC-type sugar transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.0273783 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.517173 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACAGCT CTATGAACCC GATCCGCTTC ATGACGCGTA CACGCCGGGC CGGACGCATC 
GACATCACCG ATATTCTGTC ATGGGTCTGG CTGATCGGCG GAACGCTGGC GGTGCTCGTT
CCCGTCGTCT GGGCCGGCCT TTCCTCGCTG AAGCCGGCGG CCGAAATTAC CCGCTTTCCG
CCGACGCTGC TTCCGCGCGC CGCCGTGGAG CAGACCGTGT CCGGCTTCGA CAAGCCGCTC
AGCCTGTGGC AGGTCACGAT CGACGGTCAA CAGCGCGAAA TGGCCATGGT GCGGCGCATC
GGCCTCAAGG CCCAGATGGT CGATCCGGCA AATCCGGGAC AGCCGGTCAG CGTCGATGTG
AAGGGGATCA CGCCGGTCCA GCATCTGACC GTTGCTACCG AGAATTACAC CGACCCGCTG
ACGCGCTTCA GCTTCCTGAC CTTCCTGAAG AATTCGGTGT TCGTCACCGT GGTCGCGACG
CTTCTGACGC TTGTTGTCAA CGCCATGGCG GCCTTTGCGC TGTCGAAATA CAAGTTTCGC
GGCGACACGA CGGTTTTCGT CATCATCATC TCGACCCTGA TGATCCCGCT CGCCGTCGTG
ATGGTGCCGG CCTATCTCGT CATCGTCGGG GTCGGGCTTG CCGACAATCT CTGGGGCGTC
ATCCTGCCGA CGATCGCCTC TCCGACCGCC GTCTTCTTGC TGCGGCAATA TATGCTGACC
ATCCCGGACG AACTGATCGA GGCGGCGCGG GTCGATGCGG CGAGCGAATT CTGTATCTTC
TGGCGCATCA TCCTGCCGCT GACGGCGCCG GCGCTTGCGG TGTTGGCGAT CTTTTCGGTG
CTCTGGCGCT GGAACGATTT CCTGTGGCCG CTCATCGTTC TCAACAGCCG CGAGAATTTC
ACCCTGCAGG TCGGCCTGAA CGCTTTCCAG GGAGAGTTCT CGGTGCAGTG GCACTATATC
CTGGCGATGA CCTTCCTGAG CCTGCTGCCC GTCACCGTCG TCTTCCTGTT CCTGCAGAAA
TACATCACGA CAGGCATTGC AGGTACAGGG ATGAAGTGA
 
Protein sequence
MNSSMNPIRF MTRTRRAGRI DITDILSWVW LIGGTLAVLV PVVWAGLSSL KPAAEITRFP 
PTLLPRAAVE QTVSGFDKPL SLWQVTIDGQ QREMAMVRRI GLKAQMVDPA NPGQPVSVDV
KGITPVQHLT VATENYTDPL TRFSFLTFLK NSVFVTVVAT LLTLVVNAMA AFALSKYKFR
GDTTVFVIII STLMIPLAVV MVPAYLVIVG VGLADNLWGV ILPTIASPTA VFLLRQYMLT
IPDELIEAAR VDAASEFCIF WRIILPLTAP ALAVLAIFSV LWRWNDFLWP LIVLNSRENF
TLQVGLNAFQ GEFSVQWHYI LAMTFLSLLP VTVVFLFLQK YITTGIAGTG MK