Gene Rleg2_5353 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRleg2_5353 
Symbol 
ID6978447 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhizobium leguminosarum bv. trifolii WSM2304 
KingdomBacteria 
Replicon accessionNC_011368 
Strand
Start bp977916 
End bp978845 
Gene Length930 bp 
Protein Length309 aa 
Translation table11 
GC content58% 
IMG OID643394455 
Productperiplasmic binding protein/LacI transcriptional regulator 
Protein accessionYP_002279273 
Protein GI209547355 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1879] ABC-type sugar transport system, periplasmic component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.338123 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAACGG CCACGCTTGC ATCCATCGCC TTGGCGATAT CGGTCTCTGT TGCCAATGCA 
CAGACGATCG GGGTTTCGAT GACCAATCTC GACAAATTCA GAGAGATGCT TCTGAACGGC
GTCCTCTCGC ACGGGAAGAC GATATCAGGC CTCAAGCTCG TCACCCAGAA TGCCAATGGC
GACAACGAGC TTCAGAAGAA GCAGGTTCAG CAGTTCGTTG CCGACAAGGT CGATGCTATT
ATCATGATGC TGTCTGATGG CGATTTCGGG CCGCAAATGA CCAAGATCGC AGCGGATGCC
GGCATTCCGC TGATCTACAT CAACACGACG CCCTCCAATC TTTCGGACTT GCCGGACAAT
CAGGTCGTTG TCGCCTCCGA TGAAAAAGAC TCCGGTACGC TGGAGACGAA GCAGGTGTGC
TCTCTCCTCA AGGGCAAGGG CCGTGTCGTC GTGCTGATGG GGGAGGTCTT CCATGTGGCC
GCCCGTACCC GCACCCAGGA CATATCAGAT GTCATCGCGA CGCCGGAATG CAAAGGCCTT
GAGATCGTCG AGCAGCAAGC GGCCTATTGG TCGCGCGATT ATGCCGATCA GCAGATGCAG
GAATGGCTGG CGGCCGGCGT CAAGTTCGAT GCTGTTATCG CCAACAATGA CGAGATGGCG
CTCGGTGCGA TCCGCGCCAT GAAGAAGGCC AATATCCCGA TGAAGGACGT CGTCGTCGCC
GGCGTCGATG CCACCGACGA TGCGCTTGCT GCCATGGTGG CCGGTGATCT CGACGTGACC
GTTCTCCAGA GTGCGGTCGG GCAGGGGGCG GCGGCTGTCG ACGCTGCCGT GAAGCTCGTC
AACAAGGAGA AGTTGCCGCG CGAAAACAAC GTTCCCTTCG AACTCGTCAC ACCCGAGAAC
ATTGCCCAAT ACCTGCCGAA GAGCCAGTGA
 
Protein sequence
MKTATLASIA LAISVSVANA QTIGVSMTNL DKFREMLLNG VLSHGKTISG LKLVTQNANG 
DNELQKKQVQ QFVADKVDAI IMMLSDGDFG PQMTKIAADA GIPLIYINTT PSNLSDLPDN
QVVVASDEKD SGTLETKQVC SLLKGKGRVV VLMGEVFHVA ARTRTQDISD VIATPECKGL
EIVEQQAAYW SRDYADQQMQ EWLAAGVKFD AVIANNDEMA LGAIRAMKKA NIPMKDVVVA
GVDATDDALA AMVAGDLDVT VLQSAVGQGA AAVDAAVKLV NKEKLPRENN VPFELVTPEN
IAQYLPKSQ