Gene Rleg2_5343 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRleg2_5343 
Symbol 
ID6978437 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhizobium leguminosarum bv. trifolii WSM2304 
KingdomBacteria 
Replicon accessionNC_011368 
Strand
Start bp969092 
End bp970105 
Gene Length1014 bp 
Protein Length337 aa 
Translation table11 
GC content61% 
IMG OID643394445 
Productputative ABC transporter, substrate-binding protein 
Protein accessionYP_002279263 
Protein GI209547345 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0715] ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.524159 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGTTCTT CACGCAGCCT TTTTCACACC GTCGCTTTTT CCGCGCTGCT GACCGCGGCA 
TCCTTTGCTT CAACAGCTGC CCATGCGGCC GACAAGATCA CCATCATGGT CGGCGGCTAT
GAGAAACAGA TTTATCTGCC CGCCAAACTC GCCGAATCCC TCGGTTACTT CAAGGACGAG
GGTCTCGACG TCGAGCTCCT GAACGAAGCC GCCGGCGTCG ATGCCGAGAA CCAGCTGCTG
GCAGGCGCCG TCCAGGGTGT CGTCGGCTTC TACGATCACT GCGTAGACCT GCAGGCCAAG
GGCAAATTCG TCGAATCCCT CGTCCAGTTC AGCCAGGCGC CGGGTGAGGT CGAGATGGTC
TCGAGCAAGC ATCCTGAGAT CAAGTCGCCG GCTGACTTCA AGGGCAAGAC CCTCGGCGTC
ACCGGCCTCG GCTCGTCCAC CAACTTCCTG ACGCTCTTCA TGGCCTCGAA GGCCGGCCTG
CAGCCGGGCG ACGTCGTCAC CGTTCCGGTC GGTGCCGGCG GCACGTTCAT CGCCGCCATG
CAGCAGGATC AGATCCAGGC CGGCATGACC ACCGAGCCGA CGATCTCGCG GCTGGTCAAA
ACCGGCGAAG CCAGCGTTCT CGTCGACATG CGTACGGTTG AATCGACACG AAAGGCGCTC
GGCGGCACCT ATCCGGCCGC CTCGCTCTAC ATGGAAACCG CCTGGGTCGA CGCACACAAG
GAAGAGGCGC AGAAGCTCGC CAACGCCTTC GTCAAGACGC TGAAATACAT CAACACGCAT
TCGGCCGCCG AAATCGCCGA CAAGATGCCG AAGGATTTCT ACGTCGGCGA CAAGGACGGC
TACATCAAGG CTTTGAACGA CGGCAAGGGC ATGTTCACGC CGGATGGCGT CATGCCGGAG
GATGGCCCGA AGACCGTGCT TGCCGTGCTC TCGGAATTCT CCAAGAACGT CAAGGGCAAG
CAGATCGACC TCTCCAAGAC CTACACGACT GAGTTCGTCA AGAACGTCAA GTAA
 
Protein sequence
MRSSRSLFHT VAFSALLTAA SFASTAAHAA DKITIMVGGY EKQIYLPAKL AESLGYFKDE 
GLDVELLNEA AGVDAENQLL AGAVQGVVGF YDHCVDLQAK GKFVESLVQF SQAPGEVEMV
SSKHPEIKSP ADFKGKTLGV TGLGSSTNFL TLFMASKAGL QPGDVVTVPV GAGGTFIAAM
QQDQIQAGMT TEPTISRLVK TGEASVLVDM RTVESTRKAL GGTYPAASLY METAWVDAHK
EEAQKLANAF VKTLKYINTH SAAEIADKMP KDFYVGDKDG YIKALNDGKG MFTPDGVMPE
DGPKTVLAVL SEFSKNVKGK QIDLSKTYTT EFVKNVK