Gene Rleg2_5339 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRleg2_5339 
Symbol 
ID6978433 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhizobium leguminosarum bv. trifolii WSM2304 
KingdomBacteria 
Replicon accessionNC_011368 
Strand
Start bp965146 
End bp965814 
Gene Length669 bp 
Protein Length222 aa 
Translation table11 
GC content59% 
IMG OID643394441 
Producttwo component transcriptional regulator, winged helix family 
Protein accessionYP_002279259 
Protein GI209547341 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGACTGC TTGTGGTGGA GGACAACAAG GATCTGGCGG CCTGGCTGGG CAAAGCCCTG 
CGACAGGCGC AATATGCTAT CGATATCGCC CATGACGGCG AGGATGCCGA GCATATGCTT
AAGGTGGCCG AGTATTCGGC GATGATCCTT GACCTTGCGC TGCCCAAGCT TGACGGCTTG
ACGCTTTTGA AGCGGCTGAG GCAATCCGGA AACAAGCTTC CGGTGATCAT CCTGACCGCA
AATGCAAGCC TGGACGGCCG TGTGGCGGGG CTCGACAGCG GTGCCGACGA CTATCTCGCC
AAGCCCTTCG AAATTGCCGA GCTCGAAGCG AGAATCCGCG CGGTGGTGCG CCGCGGTCAG
GATCGCGCAT CGTCCGAGAT CACCGTCGGC AACCTGCGTT TTTCCGGCGG GACGCGGCAG
TTTTTCGTCG CGGACGAACT GCTGCAGCTG ACGCCACGGG AATATGCCGT TCTCGAACAA
CTTGTCATGA AGGTGGGCAA CACGGTGTCG AAAGCCGCCC TGTCCGAAAG CGTCTTCGGT
TTCGACGACG AGGCGGATCC GAGTGCCATC GAGATCTATG TCCACCGACT CAGAAAAAAG
CTCGAAAGCA GCTCGGTTCA AATCGCGACG CTGCGCGGGC TCGGTTATCT CCTCAGACAT
GTCGAATAG
 
Protein sequence
MRLLVVEDNK DLAAWLGKAL RQAQYAIDIA HDGEDAEHML KVAEYSAMIL DLALPKLDGL 
TLLKRLRQSG NKLPVIILTA NASLDGRVAG LDSGADDYLA KPFEIAELEA RIRAVVRRGQ
DRASSEITVG NLRFSGGTRQ FFVADELLQL TPREYAVLEQ LVMKVGNTVS KAALSESVFG
FDDEADPSAI EIYVHRLRKK LESSSVQIAT LRGLGYLLRH VE