| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rleg2_5302 |
|---|
| Symbol | |
|---|
| ID | 6978396 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhizobium leguminosarum bv. trifolii WSM2304 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011368 |
|---|
| Strand | - |
|---|
| Start bp | 931475 |
|---|
| End bp | 932341 |
|---|
| Gene Length | 867 bp |
|---|
| Protein Length | 288 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 643394406 |
|---|
| Product | binding-protein-dependent transport systems inner membrane component |
|---|
| Protein accession | YP_002279224 |
|---|
| Protein GI | 209547306 |
|---|
| COG category | [E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG1173] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 30 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 20 |
|---|
| Fosmid unclonability p-value | 0.278077 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACTATGA GCACATCCGA AACCACGTCC CGCCGACTGT CCGGAACCTC GTTTGGCTAT
CGCTTCAACA TCGTCGGAGC AATCGGGCTT GCCGTCATCC TCGCCTGGGC GCTCGTCGCG
ATCTTCGCGC CGTTGATCAT CCCCTACCCC GTCGGCGAGA TCGTCGATCT CGACTATTTC
GGCCCGATGA GCCGAGAACT CTGGCTCGGC TCCGACTATC TCGGTCGCGA CATGCTCTCG
CGGATTCTGA TGGGCGCGCG GTACACGGTC GGCATTTCGC TGGCGGCGGT GACGATCGCC
TGCTTCAGCG GCGTCGTGCT CGGCATGATC GCAGCGGTCG CCGGCGGCTG GCTGGACACG
ATCCTCAGCC GCTTCCTCGA CGCCCTCAAT TCCATCCCGA GCAAGCTGTT CGGTCTGGTG
GTTGTCGCCG CCGTCGGTTC CTCGGTCCCG GTTCTGGTCC TGACGCTGTC GGTGATCTAT
ATCCCGGGCG CCTACCGCTT CGCCCGGGCG CTCGCCGTCA ACATCAATGC GATGGATTTC
ATCACGGTGG CGCGCATCCG CGGCGAAAGC ACGTTCTATC TCATTCGCTC AGAAATCCTG
CCCAACATTG TCGGGCCGGT GCTCGCCGAT CTCGGCATCC GCTTCGTCTT CATCGTTCTG
CTCCTTTCCG GGCTTTCCTT CCTGGGCCTT GGCGTCCAGC CGCCCTATGC AGACTGGGGT
GCGCTGGTGC GCGAGAATAT CGGCGGGCTG CCGTTCGGCG CGCCGGCGGT GATGTTTCCC
TCACTTGCGA TCGCCAGCCT GACGATCAGC GTCAATCTGC TGATAGACAA CCTGCCGCAG
AAGATTCGCG ACCGGAGCGT GTCATGA
|
|---|
| Protein sequence | MTMSTSETTS RRLSGTSFGY RFNIVGAIGL AVILAWALVA IFAPLIIPYP VGEIVDLDYF
GPMSRELWLG SDYLGRDMLS RILMGARYTV GISLAAVTIA CFSGVVLGMI AAVAGGWLDT
ILSRFLDALN SIPSKLFGLV VVAAVGSSVP VLVLTLSVIY IPGAYRFARA LAVNINAMDF
ITVARIRGES TFYLIRSEIL PNIVGPVLAD LGIRFVFIVL LLSGLSFLGL GVQPPYADWG
ALVRENIGGL PFGAPAVMFP SLAIASLTIS VNLLIDNLPQ KIRDRSVS
|
|---|
| |