Gene Rleg2_5281 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRleg2_5281 
Symbol 
ID6978375 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhizobium leguminosarum bv. trifolii WSM2304 
KingdomBacteria 
Replicon accessionNC_011368 
Strand
Start bp904046 
End bp904897 
Gene Length852 bp 
Protein Length283 aa 
Translation table11 
GC content59% 
IMG OID643394385 
ProductSubstrate-binding region of ABC-type glycine betaine transport system 
Protein accessionYP_002279203 
Protein GI209547285 
COG category[E] Amino acid transport and metabolism 
COG ID[COG2113] ABC-type proline/glycine betaine transport systems, periplasmic components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.102364 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.190952 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGACTT TGTGGAAGGC TCTCTGCGCC GCTGCGGTGA TCGGGATGAG CATCCTGCCT 
GCCCGCGCTG AGGAAAAGAC GATCAATCTG GGCACGATGT CGTGGGAAGA TCTAACGCCC
ATCACCGGCA TTACCAAGAA GGTTCTCGAA GACGCCGGCT ACACCGTCAA GGTGACCGAG
TTCTCCGAAT GGGGCATTGC CTATGCCGCT CTTGCCAAGG GCGATATCCA GGCTCTCACC
TCGCAGACCG ACTACGTCGC CCAGGACTAT TGGGACAAGA ACAAGAACCG CCTCGAAAAG
ATTTCGCCGG TTTCGCACGG CCTCTATCAG GGCGTCGCCG TTCCGAAATA TGTTCCGATC
GACTCGCTCG AACAGCTCAA TGAAAACGCC GACAAGTTCG GCGGCAAGAT CATCGGCATC
GAACCGGGCG CCGGCCTGAT GCGCGATACG GCGAATGCGG TCAAGGATTA CGGCCTCAAG
CTCCAGCTCG TCGAAGGCAG CACCGCCGCG ATGACGGCCG CGCTGAAGTC CGCCTACGAT
CGCAAGGAGT GGATCGCGGT CACGATCTGG GAGCCGTCAT GGATGGTCCA GAAGTACGAG
GTCAAGTACC TGAAGGATCC GAAGGGCGTA TTCCCGCCGC CGCAGAGCTA CTACTGGATC
GGCCATAAGG GCTTCTCCGA AGAATATCCG CATGCCCGCG AAGTCATGGC CAGCGTCTAC
GTGCCGATCG CCGACATCAC CACGATCAAC GGCGAAGTCA AGGACGGCAA GACGATGGAC
CAGGCCGTGC AGGATTGGAT CGGCACCCAT GCCGACCTGA TCAAGCGCTG GGAAAACATC
AAGAAGAAGT AA
 
Protein sequence
MKTLWKALCA AAVIGMSILP ARAEEKTINL GTMSWEDLTP ITGITKKVLE DAGYTVKVTE 
FSEWGIAYAA LAKGDIQALT SQTDYVAQDY WDKNKNRLEK ISPVSHGLYQ GVAVPKYVPI
DSLEQLNENA DKFGGKIIGI EPGAGLMRDT ANAVKDYGLK LQLVEGSTAA MTAALKSAYD
RKEWIAVTIW EPSWMVQKYE VKYLKDPKGV FPPPQSYYWI GHKGFSEEYP HAREVMASVY
VPIADITTIN GEVKDGKTMD QAVQDWIGTH ADLIKRWENI KKK