Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rleg2_5247 |
Symbol | |
ID | 6978341 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhizobium leguminosarum bv. trifolii WSM2304 |
Kingdom | Bacteria |
Replicon accession | NC_011368 |
Strand | - |
Start bp | 880088 |
End bp | 880615 |
Gene Length | 528 bp |
Protein Length | 175 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 643394359 |
Product | RNA polymerase, sigma-24 subunit, ECF subfamily |
Protein accession | YP_002279177 |
Protein GI | 209547259 |
COG category | [K] Transcription |
COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 0.161053 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAAGTCCT CATTCCCAAC AAGCACCGCA TCTGACTGCA GGAAACCGTC GGCCATCGAA CTGGAAATCG TTCAGTTGAC ACCGGCGTTA CGCGCCTTTG CTCGAAGGTT CCTGCGCAGC GAAGACGACA TCGATGACCT CGTGCAGGAA ACCCTGGTGA AGGCACTGCA CTCTCTGCAC CTCTACCAGC CCGGCACCTC TCTTAAGTCC TGGTTGTTCA CAATACTCAA AAACACCTTT TGCACGATCT ACCGCCGACA GAAACGTGAG CCAACGGCAG TGGAGGCGGC TTTGGAAAAA GTCGCAATTG CGCCGAGCCA GGAATGGGCA CTGCGCGAGC GCGAGCTGCA GCAAGCTTTG ACGAAACTTC CCGACGACAG ACGCCGCGCG TTGATGCTGG TGGCGAGCGG AACAAGCTAT GAGGACGCTG CAAGGCTGTG CGGCTGCCGG CTCGGCACCC TAAAAAGCCG GGTCAACCGG GCACGCGGAT CCTTGCTGTC GATGCTCGGA AACAACTTGG TCGACTGA
|
Protein sequence | MKSSFPTSTA SDCRKPSAIE LEIVQLTPAL RAFARRFLRS EDDIDDLVQE TLVKALHSLH LYQPGTSLKS WLFTILKNTF CTIYRRQKRE PTAVEAALEK VAIAPSQEWA LRERELQQAL TKLPDDRRRA LMLVASGTSY EDAARLCGCR LGTLKSRVNR ARGSLLSMLG NNLVD
|
| |