Gene Rleg2_5247 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRleg2_5247 
Symbol 
ID6978341 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhizobium leguminosarum bv. trifolii WSM2304 
KingdomBacteria 
Replicon accessionNC_011368 
Strand
Start bp880088 
End bp880615 
Gene Length528 bp 
Protein Length175 aa 
Translation table11 
GC content58% 
IMG OID643394359 
ProductRNA polymerase, sigma-24 subunit, ECF subfamily 
Protein accessionYP_002279177 
Protein GI209547259 
COG category[K] Transcription 
COG ID[COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog 
TIGRFAM ID[TIGR02937] RNA polymerase sigma factor, sigma-70 family 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.161053 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGTCCT CATTCCCAAC AAGCACCGCA TCTGACTGCA GGAAACCGTC GGCCATCGAA 
CTGGAAATCG TTCAGTTGAC ACCGGCGTTA CGCGCCTTTG CTCGAAGGTT CCTGCGCAGC
GAAGACGACA TCGATGACCT CGTGCAGGAA ACCCTGGTGA AGGCACTGCA CTCTCTGCAC
CTCTACCAGC CCGGCACCTC TCTTAAGTCC TGGTTGTTCA CAATACTCAA AAACACCTTT
TGCACGATCT ACCGCCGACA GAAACGTGAG CCAACGGCAG TGGAGGCGGC TTTGGAAAAA
GTCGCAATTG CGCCGAGCCA GGAATGGGCA CTGCGCGAGC GCGAGCTGCA GCAAGCTTTG
ACGAAACTTC CCGACGACAG ACGCCGCGCG TTGATGCTGG TGGCGAGCGG AACAAGCTAT
GAGGACGCTG CAAGGCTGTG CGGCTGCCGG CTCGGCACCC TAAAAAGCCG GGTCAACCGG
GCACGCGGAT CCTTGCTGTC GATGCTCGGA AACAACTTGG TCGACTGA
 
Protein sequence
MKSSFPTSTA SDCRKPSAIE LEIVQLTPAL RAFARRFLRS EDDIDDLVQE TLVKALHSLH 
LYQPGTSLKS WLFTILKNTF CTIYRRQKRE PTAVEAALEK VAIAPSQEWA LRERELQQAL
TKLPDDRRRA LMLVASGTSY EDAARLCGCR LGTLKSRVNR ARGSLLSMLG NNLVD