| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rleg2_5176 |
|---|
| Symbol | |
|---|
| ID | 6978270 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhizobium leguminosarum bv. trifolii WSM2304 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011368 |
|---|
| Strand | + |
|---|
| Start bp | 810049 |
|---|
| End bp | 811761 |
|---|
| Gene Length | 1713 bp |
|---|
| Protein Length | 570 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 643394301 |
|---|
| Product | GAF sensor signal transduction histidine kinase |
|---|
| Protein accession | YP_002279119 |
|---|
| Protein GI | 209547201 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG0642] Signal transduction histidine kinase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 30 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 29 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCGCTGA TCGACTACTC TGCCGAACCC CGGACGCCGC TTGCCAGCCT GACCAAAGCG
ATTTCGGGCA TCGCGCGAGC GCGCAGCATC GACGAGGTGA TCGCCACAAT CCGTGCCAGC
GCGCGGGCTC TCATCGGGTG CGAGGGTATT ACAGTCATCC GTCGGGAGGG CGACCTCTGT
CATTACATCG AGGAGGATGC CATCGGACCA CTCTGGAAGG GTCAGAAATT TCCCGCGACA
GCCTGTCTTT CCGGATGGTC GATGATCAAC AGGCAAACAG TTATCGTGCC GGATATCGAC
AAGGACGACC GGATCCCGCA CGAGCTATAC GGCGGCACGT TCGTGAGAGC CGTCGCGATG
GCGCCTATCC GCAGGGACGA TCCCGTTGGG GCGATTGGCG CATATTGGTC GAAGCCGTAC
GAACCGACGC AGTGGGAAGT CGAGACGTTG GAGGCACTGG CGGAGGCGGC CGCGACCGCG
GTCGAACATA TTGGCTTTGC GGCGCCACAG GAGCTGGCGA AGCGCGCCGC TTCCGTCGAC
CGAAAAGCCT GCGACTACCA GTCTGACGTC GACGCCGTAT CAGGGATCGC GGCTGTTCCG
ATTATGCTGG ACGTCGCGCT TCGGATGACC GGAATGGGGT TCGCCGCCAT TGCTCGCGTA
ACCGAGACGC GCTGGATCAC CTGCAGCTCC CTCGACCACG TCGGGTTCGG CCTGAAGCCG
GGCGACGAAC TTCCGATCGA GAGCACGCTT TGTAACGAAA TTCGGGACCA CCGCCAGGTG
ATCGTGTTCG ACGATGCCCA GACCTACGAC CAGTACCGTG ACCACCACAC GCCCCGTATC
TACGGTCTGC GCAGCTACAT CTCCATGCCG ATCATCCGGG GGGATGGCTC CTTCTGGGGA
ACTCTCTGCG CCATCGATCC GAAGCCGGCG AAGGTGGACA ACCCTCAGGT CGTCGGCACG
TTCAAGCTGT TCGCGGAGCT GATCGCACAT CATCTGGATG CCGCTGACCG GCTGCGTGAG
ACCGAGGTGT CGCTTCAGCG CGAGCGCGAG CTGTCGGAAC TGCGCGAGCA GTTCATCGCC
GTGCTCGGTC ATGATCTTCG CGATCCGCTG GCGGCACTCG ACGCGGGGAC GAGCCGCCTC
CTCAAGGAAG GCTGGACGGC TCGAAGCCCG CTGGTCCTGA ACCTCATGAA GGCCAGCATT
TCCCGCATGA CCGGGCTGGT CGACAACATC ATGGATCTAG CACGGGCGCG GCTTGGCGGT
GGCATCTCGC TTGATCTGAA CGAAACCGAC CTGGTAGAGA CGTTGCAGGT GGTCGCGGAC
GAGATCCGTT CGGCACATCC GCACCGTGAC ATCCGTCTCC ATCTGGAACT TCCGCAGCCG
GCACTTATCG ACCGGCTTCG GATCGCGCAG CTGTTCTCCA ACCTCGTTTC GAACGCGGTC
AGCCACGGCG CCGAGGACCA GCCGGTGGAG ATCACCGGCC GGCAGAGCGA GGACGGTATC
GAAATCTCTG TGCGCAACGG AGGCACTCCG ATCCCTGCGG ACGACTTTCA GAAGCTTTTC
CTTCCCTTCA AGCGGGGAGA CGCCTCCCGC GGCGGACAGG GGCTGGGGCT CGGTCTTTAC
ATTGCACTGG AGATCGCAAA AGCTCACGGC GGGACGATCG ATGTCTCCTC CAACAATGCG
GGAACCTGTT TCACTTTCAG GATGCCGCTC TAG
|
|---|
| Protein sequence | MALIDYSAEP RTPLASLTKA ISGIARARSI DEVIATIRAS ARALIGCEGI TVIRREGDLC
HYIEEDAIGP LWKGQKFPAT ACLSGWSMIN RQTVIVPDID KDDRIPHELY GGTFVRAVAM
APIRRDDPVG AIGAYWSKPY EPTQWEVETL EALAEAAATA VEHIGFAAPQ ELAKRAASVD
RKACDYQSDV DAVSGIAAVP IMLDVALRMT GMGFAAIARV TETRWITCSS LDHVGFGLKP
GDELPIESTL CNEIRDHRQV IVFDDAQTYD QYRDHHTPRI YGLRSYISMP IIRGDGSFWG
TLCAIDPKPA KVDNPQVVGT FKLFAELIAH HLDAADRLRE TEVSLQRERE LSELREQFIA
VLGHDLRDPL AALDAGTSRL LKEGWTARSP LVLNLMKASI SRMTGLVDNI MDLARARLGG
GISLDLNETD LVETLQVVAD EIRSAHPHRD IRLHLELPQP ALIDRLRIAQ LFSNLVSNAV
SHGAEDQPVE ITGRQSEDGI EISVRNGGTP IPADDFQKLF LPFKRGDASR GGQGLGLGLY
IALEIAKAHG GTIDVSSNNA GTCFTFRMPL
|
|---|
| |