Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rleg2_5163 |
Symbol | |
ID | 6978257 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhizobium leguminosarum bv. trifolii WSM2304 |
Kingdom | Bacteria |
Replicon accession | NC_011368 |
Strand | + |
Start bp | 802004 |
End bp | 802753 |
Gene Length | 750 bp |
Protein Length | 249 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 643394291 |
Product | short-chain dehydrogenase/reductase SDR |
Protein accession | YP_002279109 |
Protein GI | 209547191 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG3967] Short-chain dehydrogenase involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 0.898611 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 0.512081 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAATTTCT CAAACAGCAC CATCCTGATT ACTGGCGGCA ATTCCGGCAT TGGGCGCGGT CTCGCACAAG CCCTTGCGGC GCAAGGCGCC AAAGTCATCA TAACGGGTCG CAATGCCGCC ACGTTGGCGG AAACGCTGGC CGCAAATCCG ACCATCCAAG GTTATGAGTT GGAGGTCACC AACCCCGACC AGATCAACGC GTTCGTTTCG AAGATCACCG CAGATCATCC CGATCTCAAT GCCGTCATTC ACAACGCAGG TATCATGATC TTCGAGGATG TTCTCGCCGA GCCTTACGAT CTCGACATTG TCGAGCGCAC GATCGCCACG AACCTGCTCG CACCCATCCG GCTCACCGCG GCCCTCCTCC CGCATCTGAA GAGCAAGCCA GAGGCCGCGA TCGTTACCGT CTCCTCCGGT CTTGCCTTCG TGCCGCGCGC CGATGCCCTG ACCTACAGCG CAACAAAGGC GGCGATCCAC TCCTGGACCC AGAGCCTTCG CCACGAGCTG CGCAAGACGA AGATTTCGGT GGTCGAGCTA GCGCCGCCGC TGGTCGCGAC GGACCTTACC CCCGGCCAGT CTGCGAACCC TCATGCCATG CCGCTCGACG CCTTTGTTTC CGAGGCTGTT GCGCTCCTCT GCGCGGCTCA GACGCCGCAG GAAGTGCTGG TTCAGCGCGT CATGCCCCAG CGCACAGCTG AGCAGACCGA CAATTTTGAC AAGGTCTTCG GGATGATCAA TCCCGATTGA
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Protein sequence | MNFSNSTILI TGGNSGIGRG LAQALAAQGA KVIITGRNAA TLAETLAANP TIQGYELEVT NPDQINAFVS KITADHPDLN AVIHNAGIMI FEDVLAEPYD LDIVERTIAT NLLAPIRLTA ALLPHLKSKP EAAIVTVSSG LAFVPRADAL TYSATKAAIH SWTQSLRHEL RKTKISVVEL APPLVATDLT PGQSANPHAM PLDAFVSEAV ALLCAAQTPQ EVLVQRVMPQ RTAEQTDNFD KVFGMINPD
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