| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rleg2_5159 |
|---|
| Symbol | |
|---|
| ID | 6978253 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhizobium leguminosarum bv. trifolii WSM2304 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011368 |
|---|
| Strand | + |
|---|
| Start bp | 796713 |
|---|
| End bp | 799976 |
|---|
| Gene Length | 3264 bp |
|---|
| Protein Length | 1087 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 643394287 |
|---|
| Product | DNA polymerase III, alpha subunit |
|---|
| Protein accession | YP_002279105 |
|---|
| Protein GI | 209547187 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG0587] DNA polymerase III, alpha subunit |
|---|
| TIGRFAM ID | [TIGR00594] DNA-directed DNA polymerase III (polc) |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.572913 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 19 |
|---|
| Fosmid unclonability p-value | 0.312122 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGCTACG CCGAACTGCA GGTCACCACC CACTTCTCTT TCCTTCGCGG CGCAAGCTCG
GCGGAGGAAC TCTTCGCCAC CGCCAAGCTG ATGGGCATCG AGGCGCTCGG CATCGTCGAC
CGCAACAGCC TGGCCGGCAT CGTCCGGGCG CTCGAAGCCT CGCGTGCCAC CGGCCTGCGG
CTGGTGGTTG GTTGCCGGCT CGATCTCGCT GACGGCATGT CGATGCTCGT CTATCCCACC
GACCGCGCTG CCTATTCGCG GCTGACACGG CTGCTGACCT TGGGCAAGGG CAGGGGCGGG
AAGGCCAAGT GCATCCTGCA GCTCGATGAT GTGGCGCTCT ATGCCGAAGG CCTGATCGGC
GTCCTGGTGC CGGACATGGC CGACGAGACC TGCGCCGTGC AACTCAGGAA GATGGCTGAA
ATCTTCGGCG ACCGCGCCTA TGTCTCGCTC TGTCTGCGTC GCCGCCCCAA CGATCAGCTT
CGATTGCACG AGCTGTCGAA CCTGGCTGTA AAGCACCGGG TGAAGACCGT CATCACCAAT
GACGTGCTGT TTCATGAACC CGGCCGGCGG CAGCTGCAGG ATGTCGTCAC CTGCATCCGC
ACCGGCACCA CCATCGACGA TGTCGGCTTC GAGCGCGAGC GCCATGCCGA TCGCTTCCTC
AAACCGCCCG AAGAAATGGC GCGTCTATTT CCCCGGTACC CAGAAGCACT GGCACGCACG
ATGGACATCG TCGAGCGCTG CAGGTTCAGT TTGGAAGAGC TCGTCTATCA ATATCCCGAG
GAAGCACTGA TCCCGGGCAT GACCGCGCAG GAGTCGCTGG AGCATTACAC CTGGGAAGGC
GTGACGACGC GCTATCCGGA AGGGCTGCCA GCGCATGTCG AGAAAACGAT CCGGCATGAA
CTGGCGCTGA TCGAGACGAT GAAATACGCC CCCTACTTCC TGACGGTGTT CTCGATCGTC
CGTTATGCCC GAGCGCAAGG CATTCTCTGC CAGGGCCGGG GATCGGCCGC CAATTCCGCC
GTTTGCTATG TGCTCGGCAT CACCTCGATC GACCCGGAAA CAAACGATCT CCTCTTTGAG
CGCTTTGTGT CCCAGGAGCG TGACGAGCCG CCCGACATCG ATGTCGATTT CGAGCACGAA
AGACGGGAGG AGGTGATCCA GTGGATCTAC AAGACCTACG GCCATGACAA GGCCGCACTC
TGTTCGACGG TGACCCGCTA TCGCGCCAAA GGCGCTATTC GCGACGTCGG CAAGGCCCTT
GGCCTGCCCG AGGATCTGAT CAACTCGCTT TCCTCCGGCA TCTGGTCCTG GTCGGAAACG
GTCGGCGAGA ACCAGGTGCG CGCCCTCGGC CTCAATCCGG AAGACCGTCG TCTCGCCTTA
ACGCTGAGGC TTGCCCAGCA GCTGATGGGA GCACCGCGGC ATCTTGGCCA ACATCCCGGC
GGCTTCGTCT TGACCCATGA CAGGCTCGAT CATCTCGTGC CCATCGAACC CGCGGCGATG
GTCGACCGCC AGGTGATCGA ATGGGACAAG GACGACGTCG AGGCGCTCAA GATGATGAAG
GTCGATGTGC TGGCATTGGG CATGCTGACC TGCATGGCCA AGGCCTTTGC CCTCATTGGC
GAGCACAAAC ATCAGGATCT CTACCTCGCC ACCATTCCAC AGGAGGATCC CGCGACCTAT
GCGATGATCC GCAAGGCCGA TACTCTCGGG ACATTCCAGA TCGAATCCCG CGCCCAAATG
TCGATGCTCC CACGGATGAA ACCGAAAACC TTTTATGATC TCGTCATCCA GGTGGCGATC
GTCCGCCCCG GACCGATCCA GGGCGATATG GTCCATCCCT ATCTGCGCCG GCGCGAAGGC
AAGGAGAAGG TCGAATATCC GACGCCCGAA CTGGAGGCGG TCCTCCACAA GACGCTGGGT
GTGCCGCTGT TTCAGGAGTC GGCGATGAAG GTGGCGATGG TCTGTGCCGG GTTTACCGGC
GGTGAAGCCG ACCAGCTCAG GAAATCCATG GCGACCTTCA AGTTCACCGG TGGCGTTTCC
CGCTTCAAGG ACAAGCTCGT CTCCGGGATG ATCAAAAGCG GCTACTCGCC GGAATTCGCC
GAAAAGACTT TCGGCCAGCT GGAAGGTTTT GGCTCCTATG GCTTTCCCGA AAGCCATGCC
GCCTCCTTCG CACTGATCGC CTATGCCTCA AACTACGTGA AATGCCATTT TCCGGATGTC
TTTTGCGCAG CACTTCTGAA CTCGCAGCCG ATGGGCTTTT ATGCGCCGGC ACAGATCGTT
TCCGACGCGA GGAAACACGA CGTCGAGGTC TGCCCGATCT GCATCAACCG CTCGCGCTGG
GACTGCACGC TCGAGGAGGT GGAGGGTACA GGCCGGCATG CGGTGCGGCT CGGCATGCGC
CTGGTGCGAG GATTGGCGAC CGCTGACGCC GCACGCATTG TCGCCGCGCG CGCCGATGAA
CCCTTCGCAT CGGTGGACGA CATGTGGCGG CGGTCGGGTG TACCCGTGGC CTCCCTTGTC
GAGCTCGCCG AGGCCGACGC GTTCCTGCCG TCATTGCGGC TCGAGCGGCG CGATGCGCTC
TGGGCGATCA AGGCGCTGCG CGACGAGCCG CTGCCTCTGT TTACGTCCGC AGCTGAACGC
GAGGCGCGGG CGATTGCCGA GCAGCAGGAG CCGGAAGTCG AGCTCAGGCA GATGACCGAT
GGGCACAACG TCGTTGAGGA TTACAGCCAC ATCGGACTGA CACTGCGGGA GCATCCGTTA
CGATTCCTGC GGGCGGATCT CACAAAGCGC CAGATCGTCA CCTGTGCCAA GGCGATGACG
GCGCGCGATG GCCAGTGGCT GATGGCGGCC GGCCTGGTGC TGGTGCGGCA GCGGCCGGGT
TCGGCGAAGG GTGTGATGTT CATCACCATC GAGGATGAGA CCGGCATTGC CAATATCGTC
GTCTGGCCGA AGCTGTTCGA GCGCTCACGC CGCGTGGTGC TCGGCGCCAG TATGATGGCG
ATCAATGGCA GGATCCAGCG GGAAGGGGAA GTGGTTCACC TGGTCGCCCA GCAGCTCTTC
GATTTCTCGG CCGATCTGTC AGGACTTGCC GGGCGGGACG GCGCTTTCCG TGCCTCCACC
GGCCGCGGCG ATGAGTTCGC CCATGGCTCT CCTGGGAGCC CGGATTCTCG CGAAAAAGCG
CCTCCGGGGG TTCGGGCGAG AGATATGTTC ACACCCGATC TTCATATCGA CACGCTGAAG
ATTAAGAGCC GGAATTTTCA GTAG
|
|---|
| Protein sequence | MRYAELQVTT HFSFLRGASS AEELFATAKL MGIEALGIVD RNSLAGIVRA LEASRATGLR
LVVGCRLDLA DGMSMLVYPT DRAAYSRLTR LLTLGKGRGG KAKCILQLDD VALYAEGLIG
VLVPDMADET CAVQLRKMAE IFGDRAYVSL CLRRRPNDQL RLHELSNLAV KHRVKTVITN
DVLFHEPGRR QLQDVVTCIR TGTTIDDVGF ERERHADRFL KPPEEMARLF PRYPEALART
MDIVERCRFS LEELVYQYPE EALIPGMTAQ ESLEHYTWEG VTTRYPEGLP AHVEKTIRHE
LALIETMKYA PYFLTVFSIV RYARAQGILC QGRGSAANSA VCYVLGITSI DPETNDLLFE
RFVSQERDEP PDIDVDFEHE RREEVIQWIY KTYGHDKAAL CSTVTRYRAK GAIRDVGKAL
GLPEDLINSL SSGIWSWSET VGENQVRALG LNPEDRRLAL TLRLAQQLMG APRHLGQHPG
GFVLTHDRLD HLVPIEPAAM VDRQVIEWDK DDVEALKMMK VDVLALGMLT CMAKAFALIG
EHKHQDLYLA TIPQEDPATY AMIRKADTLG TFQIESRAQM SMLPRMKPKT FYDLVIQVAI
VRPGPIQGDM VHPYLRRREG KEKVEYPTPE LEAVLHKTLG VPLFQESAMK VAMVCAGFTG
GEADQLRKSM ATFKFTGGVS RFKDKLVSGM IKSGYSPEFA EKTFGQLEGF GSYGFPESHA
ASFALIAYAS NYVKCHFPDV FCAALLNSQP MGFYAPAQIV SDARKHDVEV CPICINRSRW
DCTLEEVEGT GRHAVRLGMR LVRGLATADA ARIVAARADE PFASVDDMWR RSGVPVASLV
ELAEADAFLP SLRLERRDAL WAIKALRDEP LPLFTSAAER EARAIAEQQE PEVELRQMTD
GHNVVEDYSH IGLTLREHPL RFLRADLTKR QIVTCAKAMT ARDGQWLMAA GLVLVRQRPG
SAKGVMFITI EDETGIANIV VWPKLFERSR RVVLGASMMA INGRIQREGE VVHLVAQQLF
DFSADLSGLA GRDGAFRAST GRGDEFAHGS PGSPDSREKA PPGVRARDMF TPDLHIDTLK
IKSRNFQ
|
|---|
| |