| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rleg2_5151 |
|---|
| Symbol | |
|---|
| ID | 6978245 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhizobium leguminosarum bv. trifolii WSM2304 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011368 |
|---|
| Strand | + |
|---|
| Start bp | 789081 |
|---|
| End bp | 790991 |
|---|
| Gene Length | 1911 bp |
|---|
| Protein Length | 636 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 56% |
|---|
| IMG OID | 643394279 |
|---|
| Product | PAS/PAC sensor signal transduction histidine kinase |
|---|
| Protein accession | YP_002279097 |
|---|
| Protein GI | 209547179 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG4191] Signal transduction histidine kinase regulating C4-dicarboxylate transport system |
|---|
| TIGRFAM ID | [TIGR00229] PAS domain S-box |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.300471 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 22 |
|---|
| Fosmid unclonability p-value | 0.605559 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGGATAGAG AGCCGGAAAC CGATCCCATT ATCGATCTGA TCCCCGCAAT GGTGTGGTCG
GCAACATCGG ATGGCATGCT GGATTTCGCT AACCGGCACT TTCTCGACTT TATCGGGGCC
CCGCTCGAGC AAATCTCCGG CGAGAGATTT TATGGAATAT TCCATCCCGA CGACACGTCG
CGACTCGCTT CCGAGTGGCA TGAGATCATG GCTTCTAAAA ATGCGAGGGA GGTAGAGGGC
AGGCTCAGGC GCGCGGATGG CCACTATCGT TGGTGCACGC TTCGTCAAAA GCCTCGGTTC
GATCCCGACG GAAATGTCGT CAGATGGTAT GGTGTTGTCC TTGATATCGA AGACCGCAAG
CAGGCCGAAA ATGCGCTGAA GGAGACGAAG ACGGCACTTG CCGCCAGCGA AGAGAATCTA
AGCCTCATCA TCAATTCATT GCCTGTGCTC GTATGGTCGG CACGGCCAGA TGGCAGCGCC
GATTTTGTCA ATCAAAGCTG GTTGGATTAT GCGGGTCGCC CGGCCGACCA GATCCTCGAA
TGGGGCTTCC TCGACCTTTA CCACCCGGAT GATATTCCCG GTATGGTCGC CATCTGGAAG
AGAGATCTCG AACATTCCGA CCATACCGTT CTGAAGGGCC GTATTCGCGG AGCGGACGGT
AACTACCGCT GGTTCTATTT CTCGGGCCGC AAGCTGGTCG ATGCCAACGG CGTCGTGCGT
TGGTTCGGCT GCAATATCGA TATCGAGGAT CTGCAAGCGG CAGAGAATGC GCTGAGAGAA
AGCGAAACCG CGCTCAGGGA AAGCGAACAC AAGCTCAGTC TCATCATCAA TACGATACCG
GCGATGGCTT GGTCCTGTAC ACCAGATGGC CGGCTTGAAT ACTTTAACCG AAACCTGATC
GATTATGTCG GCCTACCCGT CGAGGAAATC GTCGGGTTCG GCTTTTATCG CATGTTTCAC
CCGGATGATG TCGAGCCGAT GCGTTTCGCC TGGGACGACA TCGTCGCCAC GAAAAAAAGT
CGTCCGGTGG ACGCGCGCAT CAGACGGGCG GATGGCGAAT ATCGATGGTT CAACCTCCGG
CAAAGCCCCC TTCTGGACAG AGATGGGAAT GTCGTGCGGT GGTACGGCGT CGTCGTCGAT
ATCGAGGATC GCAAGCGGGC GGAAGAGTCC TTGAGACAAA GCCAGAGCAA TCTGGCGCAT
GTGACGCGTA TGACAGCCAC GGGCGAGCTT GCCGTTTCGA TCGCCCACGA GGTCAACCAG
CCGCTCATGG CAATCGTCAC GAATGCTGGC ACGTGCCTGC GCTGGCTGCA GCCGGGACAC
ACCGATATCG AGCAGGCCCG GCTGGCGGCC GAGAGGATCG TCAAGGATGG TCATCGCGCC
GGCGATATCA TCGCGAGTAT CAGGGCAATG GCTCAAAAGT CACCAGCCCG GATGGAACAA
ACTGATTTGA AAGGCGCCTT GCATCACGTG CTGGATCTTT TGAGAGGGGA ACTTCGTCAC
CGAGACATCG AACTCGATCT TGATCTTCCG CAACGTTCTC TTGAGGTCAT TGGAGATCGA
ACCCAGTTGC AGCAAGTCGT GCTGAATTTG GTCATGAATA GCGCCGAAGA GATGGCCAGA
TCTTCAGGTG AAAGGCGTAT CGGCATCAGA TGCGCCGAGG ACGAGCACCA ATTCGTGAAG
GTGAGCGTCT CGGATACCGG ACGCGGCGTT TCTTCCGACG AGTTGGATCG GGTTTTCGAA
ACGTTCTACA GCACGAAGGC AGATGGCATC GGAATGGGAC TTTCGATATG CCGTTCCATT
GTCGAAGCTC ATGGCGGCCG GATCTGGGCT TCGGCGGCAG ACAATCAGAT TGGCGCGGTG
TTCACGTTTA CGCTGCCGAT GGCGGAGGTT GCGGCCGCAG ATGATCGATG A
|
|---|
| Protein sequence | MDREPETDPI IDLIPAMVWS ATSDGMLDFA NRHFLDFIGA PLEQISGERF YGIFHPDDTS
RLASEWHEIM ASKNAREVEG RLRRADGHYR WCTLRQKPRF DPDGNVVRWY GVVLDIEDRK
QAENALKETK TALAASEENL SLIINSLPVL VWSARPDGSA DFVNQSWLDY AGRPADQILE
WGFLDLYHPD DIPGMVAIWK RDLEHSDHTV LKGRIRGADG NYRWFYFSGR KLVDANGVVR
WFGCNIDIED LQAAENALRE SETALRESEH KLSLIINTIP AMAWSCTPDG RLEYFNRNLI
DYVGLPVEEI VGFGFYRMFH PDDVEPMRFA WDDIVATKKS RPVDARIRRA DGEYRWFNLR
QSPLLDRDGN VVRWYGVVVD IEDRKRAEES LRQSQSNLAH VTRMTATGEL AVSIAHEVNQ
PLMAIVTNAG TCLRWLQPGH TDIEQARLAA ERIVKDGHRA GDIIASIRAM AQKSPARMEQ
TDLKGALHHV LDLLRGELRH RDIELDLDLP QRSLEVIGDR TQLQQVVLNL VMNSAEEMAR
SSGERRIGIR CAEDEHQFVK VSVSDTGRGV SSDELDRVFE TFYSTKADGI GMGLSICRSI
VEAHGGRIWA SAADNQIGAV FTFTLPMAEV AAADDR
|
|---|
| |