Gene Rleg2_5040 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRleg2_5040 
Symbol 
ID6978134 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhizobium leguminosarum bv. trifolii WSM2304 
KingdomBacteria 
Replicon accessionNC_011368 
Strand
Start bp688080 
End bp688868 
Gene Length789 bp 
Protein Length262 aa 
Translation table11 
GC content55% 
IMG OID643394183 
ProductABC-2 type transporter, NodJ family 
Protein accessionYP_002279001 
Protein GI209547083 
COG category[G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1682] ABC-type polysaccharide/polyol phosphate export systems, permease component 
TIGRFAM ID[TIGR01291] ABC-2 type transporter, NodJ family 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones38 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTGCCG ATAGCCTAGC GACACCACTG GGTGGCAGCT TGAACTGGAT TGCGGTCTGG 
CGCCGCAATT ATCTGGCATG GAAAAAAGCC GCACTCGCAT CGCTTCTTGG TCATCTCGCC
GAACCCCTGA TTTACCTTTT TGGCCTCGGC GCTGGGCTGG GTGTGATGGT GGGCCATGTC
GATGGTGTTT CATATACTGC TTTTTTGGCC GCTGGAATGG TCGCGACAAG TGCGATGACT
GCAGCAACCT TCGAGACGAT CTATGCAGCT TTCGGCCGGA TGGAAGGCCA GGGAACTTGG
GAGGCGATGC TCTACACACA GCTAAGGCTG GGCGACATTG TGCTCGGTGA AATGGCCTGG
GCAGCAACGA AGGCGGCCCT GGCGGGTGTG GGTATAGCCA CTGTGGCGGC TGTTTTAGGT
TACACGCAGT GGCTGTCGCT AATATACGTG CTTCCGGTTG TCGCGCTGAC GGGTTTGGCC
TTTGCAAGCC TCGGAATGGT CGTCACAGCC CTCGCGCCTA GCTACGACTA CTTCATCTTT
TATCAAACGC TGGTTATTAC CCCTATATTG TTTCTTTCCG GCGCGGTCTT CCCGGTCGAC
CAACTGCCTT TTGTATTCCA GACGGTGGCG CGATTTCTGC CTTTGGCACA TGCGATTGAA
CTAATACGCC CGATAATGCT CGGTCACCCC GTCGTGGAAG TCTGCTTCCA TGTCAGCGCA
CTTTCCTTCT ACATCGTCAT CCCATTCTTT GTGTCAACAG CGTTGCTTCG TCGCCGGCTT
TTGCGGTGA
 
Protein sequence
MSADSLATPL GGSLNWIAVW RRNYLAWKKA ALASLLGHLA EPLIYLFGLG AGLGVMVGHV 
DGVSYTAFLA AGMVATSAMT AATFETIYAA FGRMEGQGTW EAMLYTQLRL GDIVLGEMAW
AATKAALAGV GIATVAAVLG YTQWLSLIYV LPVVALTGLA FASLGMVVTA LAPSYDYFIF
YQTLVITPIL FLSGAVFPVD QLPFVFQTVA RFLPLAHAIE LIRPIMLGHP VVEVCFHVSA
LSFYIVIPFF VSTALLRRRL LR