Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rleg2_5040 |
Symbol | |
ID | 6978134 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhizobium leguminosarum bv. trifolii WSM2304 |
Kingdom | Bacteria |
Replicon accession | NC_011368 |
Strand | + |
Start bp | 688080 |
End bp | 688868 |
Gene Length | 789 bp |
Protein Length | 262 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 643394183 |
Product | ABC-2 type transporter, NodJ family |
Protein accession | YP_002279001 |
Protein GI | 209547083 |
COG category | [G] Carbohydrate transport and metabolism [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1682] ABC-type polysaccharide/polyol phosphate export systems, permease component |
TIGRFAM ID | [TIGR01291] ABC-2 type transporter, NodJ family |
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Plasmid Coverage information |
Num covering plasmid clones | 34 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 38 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGTGCCG ATAGCCTAGC GACACCACTG GGTGGCAGCT TGAACTGGAT TGCGGTCTGG CGCCGCAATT ATCTGGCATG GAAAAAAGCC GCACTCGCAT CGCTTCTTGG TCATCTCGCC GAACCCCTGA TTTACCTTTT TGGCCTCGGC GCTGGGCTGG GTGTGATGGT GGGCCATGTC GATGGTGTTT CATATACTGC TTTTTTGGCC GCTGGAATGG TCGCGACAAG TGCGATGACT GCAGCAACCT TCGAGACGAT CTATGCAGCT TTCGGCCGGA TGGAAGGCCA GGGAACTTGG GAGGCGATGC TCTACACACA GCTAAGGCTG GGCGACATTG TGCTCGGTGA AATGGCCTGG GCAGCAACGA AGGCGGCCCT GGCGGGTGTG GGTATAGCCA CTGTGGCGGC TGTTTTAGGT TACACGCAGT GGCTGTCGCT AATATACGTG CTTCCGGTTG TCGCGCTGAC GGGTTTGGCC TTTGCAAGCC TCGGAATGGT CGTCACAGCC CTCGCGCCTA GCTACGACTA CTTCATCTTT TATCAAACGC TGGTTATTAC CCCTATATTG TTTCTTTCCG GCGCGGTCTT CCCGGTCGAC CAACTGCCTT TTGTATTCCA GACGGTGGCG CGATTTCTGC CTTTGGCACA TGCGATTGAA CTAATACGCC CGATAATGCT CGGTCACCCC GTCGTGGAAG TCTGCTTCCA TGTCAGCGCA CTTTCCTTCT ACATCGTCAT CCCATTCTTT GTGTCAACAG CGTTGCTTCG TCGCCGGCTT TTGCGGTGA
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Protein sequence | MSADSLATPL GGSLNWIAVW RRNYLAWKKA ALASLLGHLA EPLIYLFGLG AGLGVMVGHV DGVSYTAFLA AGMVATSAMT AATFETIYAA FGRMEGQGTW EAMLYTQLRL GDIVLGEMAW AATKAALAGV GIATVAAVLG YTQWLSLIYV LPVVALTGLA FASLGMVVTA LAPSYDYFIF YQTLVITPIL FLSGAVFPVD QLPFVFQTVA RFLPLAHAIE LIRPIMLGHP VVEVCFHVSA LSFYIVIPFF VSTALLRRRL LR
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