Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rleg2_5037 |
Symbol | |
ID | 6978131 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhizobium leguminosarum bv. trifolii WSM2304 |
Kingdom | Bacteria |
Replicon accession | NC_011368 |
Strand | + |
Start bp | 685058 |
End bp | 685705 |
Gene Length | 648 bp |
Protein Length | 215 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 643394180 |
Product | polysaccharide deacetylase |
Protein accession | YP_002278998 |
Protein GI | 209547080 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0726] Predicted xylanase/chitin deacetylase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 36 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGACACGGC GCGAGTATAT AAGCGAAGTA CCCTTCCAGG CGGGGACGGG CGATCGTAGC ATCTACTTGA CGTTCGACGA TGGCCCAAAT CCGGAATGTA CCAGGAGGAT CTTGGATGTG CTCGCGGAAC ACCGAGTGCC AGCTACCTTT TTCGTGCTCG GTGCCTATGT AGAAGACCAC CCGGATCTCC TCCGCCGAGT AGTGGCAGGA GGTCACTCGG TTGGTAATCA CACAATGACC CATCCCGATC TTTCGGCCTG TGACTCCGAG ACCGTTGAAC GAGAGATAAG GGAAGCAAGC AAAGCAATTG TCTCGGCGTG TCCACAAGCT GCAGTTCAGC ACATACGTGC ACCTTATGGA GCTTGGAGCG AAGATGTGCT TTCGAGATCA ATGATCGCCG GACTTCGTCC CGTTCACTGG TCGATCGACC CTAGAGATTG GTCTCGCCCT GGCGTCGATG CCATCGTTGA TACGGTACTC GCGGCTGCCC GTCCGGGTGC AATCGTGCTT TTGCACGACG GTTGTCCGCC TGATGAGGTT GAGAACTGCA AGCCTACGGG ATTGCGTGAT CAAACGATCT TGGCGCTCCT GCGAATTATC CCGGCACTGC AAAGTCGGGG ATTCTCCCTT TGTTCACTCC CCCAGTAA
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Protein sequence | MTRREYISEV PFQAGTGDRS IYLTFDDGPN PECTRRILDV LAEHRVPATF FVLGAYVEDH PDLLRRVVAG GHSVGNHTMT HPDLSACDSE TVEREIREAS KAIVSACPQA AVQHIRAPYG AWSEDVLSRS MIAGLRPVHW SIDPRDWSRP GVDAIVDTVL AAARPGAIVL LHDGCPPDEV ENCKPTGLRD QTILALLRII PALQSRGFSL CSLPQ
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