Gene Rleg2_5037 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRleg2_5037 
Symbol 
ID6978131 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhizobium leguminosarum bv. trifolii WSM2304 
KingdomBacteria 
Replicon accessionNC_011368 
Strand
Start bp685058 
End bp685705 
Gene Length648 bp 
Protein Length215 aa 
Translation table11 
GC content56% 
IMG OID643394180 
Productpolysaccharide deacetylase 
Protein accessionYP_002278998 
Protein GI209547080 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0726] Predicted xylanase/chitin deacetylase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACACGGC GCGAGTATAT AAGCGAAGTA CCCTTCCAGG CGGGGACGGG CGATCGTAGC 
ATCTACTTGA CGTTCGACGA TGGCCCAAAT CCGGAATGTA CCAGGAGGAT CTTGGATGTG
CTCGCGGAAC ACCGAGTGCC AGCTACCTTT TTCGTGCTCG GTGCCTATGT AGAAGACCAC
CCGGATCTCC TCCGCCGAGT AGTGGCAGGA GGTCACTCGG TTGGTAATCA CACAATGACC
CATCCCGATC TTTCGGCCTG TGACTCCGAG ACCGTTGAAC GAGAGATAAG GGAAGCAAGC
AAAGCAATTG TCTCGGCGTG TCCACAAGCT GCAGTTCAGC ACATACGTGC ACCTTATGGA
GCTTGGAGCG AAGATGTGCT TTCGAGATCA ATGATCGCCG GACTTCGTCC CGTTCACTGG
TCGATCGACC CTAGAGATTG GTCTCGCCCT GGCGTCGATG CCATCGTTGA TACGGTACTC
GCGGCTGCCC GTCCGGGTGC AATCGTGCTT TTGCACGACG GTTGTCCGCC TGATGAGGTT
GAGAACTGCA AGCCTACGGG ATTGCGTGAT CAAACGATCT TGGCGCTCCT GCGAATTATC
CCGGCACTGC AAAGTCGGGG ATTCTCCCTT TGTTCACTCC CCCAGTAA
 
Protein sequence
MTRREYISEV PFQAGTGDRS IYLTFDDGPN PECTRRILDV LAEHRVPATF FVLGAYVEDH 
PDLLRRVVAG GHSVGNHTMT HPDLSACDSE TVEREIREAS KAIVSACPQA AVQHIRAPYG
AWSEDVLSRS MIAGLRPVHW SIDPRDWSRP GVDAIVDTVL AAARPGAIVL LHDGCPPDEV
ENCKPTGLRD QTILALLRII PALQSRGFSL CSLPQ