| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rleg2_4998 |
|---|
| Symbol | |
|---|
| ID | 6978092 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhizobium leguminosarum bv. trifolii WSM2304 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011368 |
|---|
| Strand | + |
|---|
| Start bp | 643862 |
|---|
| End bp | 645331 |
|---|
| Gene Length | 1470 bp |
|---|
| Protein Length | 489 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 643394144 |
|---|
| Product | succinic semialdehyde dehydrogenase |
|---|
| Protein accession | YP_002278962 |
|---|
| Protein GI | 209547044 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1012] NAD-dependent aldehyde dehydrogenases |
|---|
| TIGRFAM ID | [TIGR01780] succinate-semialdehyde dehydrogenase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 29 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCTCGAAC TCAAAGACCC CACGTTATTC ATCCAACAGG CGCTGATCGG CGGTGACTGG
GCCGATGCCG CCGAAGGTGC GACGCTGACC GTCGACAACC CTGCGACCGG TGCCACGATC
GGCACGGTGC CGAACTGCAG CGCTGAGGAT ACGGAGCGGG CGATTGCGGC CGCTGCGGAT
GCGTTCAGGA CATGGAGGCT GACGACTGCT TCCGAGCGGG CGCGGCTGCT GCAGCGCTGG
CATGACCTCA TGATCGAGAA TGCTGACGAT CTCGCTCTGA TCATGACCTT GGAACAAGGC
AAGCCGCTTT CCGAGGCGCG AGGCGAAGTC CTTTATGGCG CGACCTTTAT CAAGTGGTTT
GCCGAGGAGG CGCGCCGCAG CTACGGCATG ACAATCCCCG CTCCCACGAC CGATCGCCGT
ATCCTGGTCA GCAAGGAGCC GGTCGGGGTT GCCGCGGTCA TCACACCGTG GAATTTTCCG
AATGCGATGA TCACGCGAAA ATGCGCGCCG GCGCTTGCGG CAGGCTGCAC CGTCGTGGTC
AAGCCATCGG AACTGACGCC CTATTCAGCA TTGGCGCTGG GCCTGCTGGC CGAGCGCGCC
GGCATCCCGG CCGGTGTCAT CAACATCGTC ACCGGCCTGC CCAAGACGAT TGGTGCAACG
CTGACGGCAA GCCCCGATGT CCGCAAGGTA TCCTTCACCG GCTCGACGGC CGTGGGTTCG
CTGCTGATGG CACAATGCGC ACCGACCGTG AAGCGGCTCA GCCTCGAACT CGGCGGCAAT
GCGCCCTTCA TCGTCTTCGA CGATGCGGAT CTCGATGAGG CGGTCGAGGC GGCTCTCGTC
TCGAAATTCC GCAATGGTGG CCAGACCTGT GTCTGCGCCA ACAGGCTGCT CGTTCAGGCC
GGCATCTATG ATACTTTTGC CGGAAAGCTC GCGGCGCGCG TCAGCGCCAT GCGGATCGGC
TCGGGCGTGG ATGATGGCAT CCAGATCGGT CCGATGATCA ATGTCGCGGC CGTCGGCAAG
ATCAGCGCTC ACATCGAGGA TGCGCTAGAG CTGGGCGCCA GAAATATCAC ACCGCGAAAC
GACCTGCCGG CAGGTGAGCG TTTCGTTGCG CCGACCGTGC TCACAGGTGC GACCACCGCC
ATGCGGCTTG CAAGCGAAGA GACCTTCGGT CCGGTTGCGC CGCTGTTCCG CTTTGAGACC
GAGGAGGAGG CGATCGCGAT CGCCAATGCA ACGCCCTATG GTCTGGCCGC CTATTTCTTC
ACCGAGAACT TGCACCGCGC CTGGCGCGTT GGCGAGGCGT TGGAATTCGG AATGGTCGGT
CTCAATACGG GCAGCGTATC GATGGAAGTG GCGCCTTTTG GCGGTGTCAA GCAGTCCGGC
CTCGGCCGCG AGGGAGGTCC GACCGGAATG GAGGAATACC TGGAGGTAAA GGCCTTCCAT
CTCGGTGGCC TGAAGGCGCA GCGGGTCTGA
|
|---|
| Protein sequence | MLELKDPTLF IQQALIGGDW ADAAEGATLT VDNPATGATI GTVPNCSAED TERAIAAAAD
AFRTWRLTTA SERARLLQRW HDLMIENADD LALIMTLEQG KPLSEARGEV LYGATFIKWF
AEEARRSYGM TIPAPTTDRR ILVSKEPVGV AAVITPWNFP NAMITRKCAP ALAAGCTVVV
KPSELTPYSA LALGLLAERA GIPAGVINIV TGLPKTIGAT LTASPDVRKV SFTGSTAVGS
LLMAQCAPTV KRLSLELGGN APFIVFDDAD LDEAVEAALV SKFRNGGQTC VCANRLLVQA
GIYDTFAGKL AARVSAMRIG SGVDDGIQIG PMINVAAVGK ISAHIEDALE LGARNITPRN
DLPAGERFVA PTVLTGATTA MRLASEETFG PVAPLFRFET EEEAIAIANA TPYGLAAYFF
TENLHRAWRV GEALEFGMVG LNTGSVSMEV APFGGVKQSG LGREGGPTGM EEYLEVKAFH
LGGLKAQRV
|
|---|
| |