| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rleg2_4949 |
|---|
| Symbol | |
|---|
| ID | 6978043 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhizobium leguminosarum bv. trifolii WSM2304 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011368 |
|---|
| Strand | + |
|---|
| Start bp | 591423 |
|---|
| End bp | 592400 |
|---|
| Gene Length | 978 bp |
|---|
| Protein Length | 325 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 643394101 |
|---|
| Product | polar amino acid ABC transporter, inner membrane subunit |
|---|
| Protein accession | YP_002278919 |
|---|
| Protein GI | 209547001 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0765] ABC-type amino acid transport system, permease component |
|---|
| TIGRFAM ID | [TIGR01726] amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 0.569471 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 35 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATGATGA TGACATCGTA TCGGTGGCTT CGACGCAATC TGTTTGCAAA CACAGTAGAT
TCGATCTTAA CCATATTCGT TCTCGCGCTG GTTGCCTGGT TGACGGCACG ATTTTTGGGA
TGGGCAATCG AGGATGCGCG CTGGCGCGGA ATCTACGAGA GCCGGCGCCT TTTGCTGGTT
GGCCTCTATC CGCCGGAAGA GATATGGCGG ACCTGGTTGA TGTTGGGCAT CCTTTGCATG
GCGATTGGCG CCGCTATGAT ACCGAGTTTG CGGCGCTTCG CCGTCGCGAT TTTGCTGGCG
GCTTGCGCGG GTGCCGTCCT CGTATTGGCG CCTCCCGGGC TTGATCGATG GGGTGGCCTG
CTGCTCAGCC TCATGCTGGC AATCGTTGTC TCGGCTGCGT CCCTGCCACT TGGTACCCTC
CTGGCGTTTG GCCGGTCGAG TCGCAACCCG AGCCTGAGGG CCTGCTGCGC CGGCTATATC
GAGGTGATGC GGTCGGTTCC CTTGATCCTG GTCGTCTATT GGATCTGGAT CACCGTGCCC
CTGTTCGCGC CGGAATCCTC AATGTCATCT CTCGTTCGCG GAATGATTGG CTACACGGTG
TTCAATGCGG CCTATGTCGC TGAGTTCGTG CGCAGCGGCC TTCAGGCCGT GCCCCGCGGA
CAACGGGAGG CGGCTCAGTC TCTCGGAATG TCGAATTGGA CGGTATCGAC GGACATCGTA
TTGCCGCAAG CAATTCGGTT CGTGCAACCG GCTCTAGTCG GTAATGTGCT CGATGTATTC
AACGGCGCGA CACTTGTGTT CATCATTGGA CTAACAGACT TCCTGCGAGC TGGGCAGATG
ATCCTGGCTG ACCCTAGCTC AAGCAGCGCC GTACAAGAAG TCTACGTGTT CATGTTCGCG
GTCTACTTCC TGATCGGCTC GGCAATCACC TTCGGAGCGC GGCGGATGGA AGCGCGCATG
CAGAGGAGTA CCCGTTAA
|
|---|
| Protein sequence | MMMMTSYRWL RRNLFANTVD SILTIFVLAL VAWLTARFLG WAIEDARWRG IYESRRLLLV
GLYPPEEIWR TWLMLGILCM AIGAAMIPSL RRFAVAILLA ACAGAVLVLA PPGLDRWGGL
LLSLMLAIVV SAASLPLGTL LAFGRSSRNP SLRACCAGYI EVMRSVPLIL VVYWIWITVP
LFAPESSMSS LVRGMIGYTV FNAAYVAEFV RSGLQAVPRG QREAAQSLGM SNWTVSTDIV
LPQAIRFVQP ALVGNVLDVF NGATLVFIIG LTDFLRAGQM ILADPSSSSA VQEVYVFMFA
VYFLIGSAIT FGARRMEARM QRSTR
|
|---|
| |