Gene Rleg2_4948 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRleg2_4948 
Symbol 
ID6978042 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhizobium leguminosarum bv. trifolii WSM2304 
KingdomBacteria 
Replicon accessionNC_011368 
Strand
Start bp590218 
End bp591426 
Gene Length1209 bp 
Protein Length402 aa 
Translation table11 
GC content57% 
IMG OID643394100 
Productpolar amino acid ABC transporter, inner membrane subunit 
Protein accessionYP_002278918 
Protein GI209547000 
COG category[E] Amino acid transport and metabolism 
COG ID[COG4597] ABC-type amino acid transport system, permease component 
TIGRFAM ID[TIGR01726] amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.994654 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACAATC TTACGCAAGT GCGGCTTCAG CCGGTTGCGC CTCCGTCCAT AGGACGGCGG 
CGCGCCGCGC GGATCCGCCA CAGAATGATC CACGCCAGCG TCGTCATTGC TGCAATCGCA
ATCGTTGCAT TGACAGGCGT CGCAATCCAG CAAAGTCTGG CAGAACGTGG GATCGCCTTC
AGCTTTGGAT ATCTCTTCCG GCCCTCGCAA TTCAATGTCA GTGAAGGTTT TGCCGCGGTG
TGGGATGGGT GGTGGCCCGC ATTGGTTCAG GTGACATCTG ATTCCACCAA TCTGCAGATG
CTCACCGCAG GTTTGTTCAA CACCATCAAA GTGGCGCTGC TCGCGATCCT CTTCTCGACC
GTCATCGGTG TCATCTTTGG CGTTGCTCGC CTGTCAACGA ACTGGCTGAT ACGACAGATC
GCTTTCGCCA TCGTGGAGTT CGTCCGCAAC ACGCCGCTGC TGATACAAGT GGTATTCTGG
TACTTTGCAT TTTTCCTGCG GGTGCCGCCA GTCACCGACG CCGCCAACGT CGAGAAGTGG
TTTGTCTTCG GCCAATCTGG ATTGTTTTTG CCGTTGCTTC AGATTTCCGA TGGCGTGGAC
TCAGGCACCG TGGTTCTGAT TGCCCTCGCA ATAGCCTTGA TGATTCTCGC CTGTTGGCCG
CGTCTCTCAT TGGGTCGCCG CTGGGTCCTT TTTGGTGCAG GCGCAGTTGC CGCTGCTGCC
GGCTACGCCA CGGGCTTTCG CATGGATCTC GCCTTGCCGC TCGTCGGCCG TTTCGGCGCA
ACGGGTGGAC TGCAGCTCTC CCCGGAGATG TCGGCAATCC TCATCGCCAT CGTCGTCAAC
AGTGCAGCCT ACATTGCCGA AATCGTTCGC GGTGCTATCG AAGGATTGCC TAAGGGACAA
TGGGAGGCCG CTGCCGCGGT CGGGCTATCT CGCAAGGACA CGATTCGGGA TGTGATCCTT
CCCCAGGTGT TCAGGATCAT TCTGCCATCG CTTGCAAACC GCTATATCAG CCTGACGAAG
GACACGTCTC TCGGGATCGC GATCGGTTTC CCTGATCTCT TCAACGTTAG CGGCACGGTC
GCCAATCAGA CCGGACACAG CCTCGAGACT GTGTTGATCG TGATGGCGAT TTATCTGATG
CTCAGTTGGC TGATCAGCGC ATTCATCAAT TTTTTGAATG GGCGGGTTAT TCTGGAGGGG
GCACGATGA
 
Protein sequence
MNNLTQVRLQ PVAPPSIGRR RAARIRHRMI HASVVIAAIA IVALTGVAIQ QSLAERGIAF 
SFGYLFRPSQ FNVSEGFAAV WDGWWPALVQ VTSDSTNLQM LTAGLFNTIK VALLAILFST
VIGVIFGVAR LSTNWLIRQI AFAIVEFVRN TPLLIQVVFW YFAFFLRVPP VTDAANVEKW
FVFGQSGLFL PLLQISDGVD SGTVVLIALA IALMILACWP RLSLGRRWVL FGAGAVAAAA
GYATGFRMDL ALPLVGRFGA TGGLQLSPEM SAILIAIVVN SAAYIAEIVR GAIEGLPKGQ
WEAAAAVGLS RKDTIRDVIL PQVFRIILPS LANRYISLTK DTSLGIAIGF PDLFNVSGTV
ANQTGHSLET VLIVMAIYLM LSWLISAFIN FLNGRVILEG AR