| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rleg2_4904 |
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| Symbol | |
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| ID | 6977998 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhizobium leguminosarum bv. trifolii WSM2304 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011368 |
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| Strand | + |
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| Start bp | 543158 |
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| End bp | 545086 |
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| Gene Length | 1929 bp |
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| Protein Length | 642 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 643394061 |
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| Product | diguanylate cyclase with PAS/PAC sensor |
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| Protein accession | YP_002278879 |
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| Protein GI | 209546961 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG3706] Response regulator containing a CheY-like receiver domain and a GGDEF domain |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box
[TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.0484368 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 0.638753 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATGAGTT CGTTACAGGT ATTGGAAGGT GGATACATCG CGGTGAATGG CAATTGGACG
CAATTCGGTG GCAACCTTTC CTTCGTGTGC CTGGCAATTT CGCTCTGGGC GCTTTTTTCG
ATTGAGTTTC AGCGCCGGTC CTTCAGGCAG GAAAAAATCG CCTTCGGGAT CATAGCCGGC
GGCGCCTCCA TCGGATCCAT ATTGCTGGCC GTTGAATTCC ACCCCGGCAT CTATATCGAC
CTGCGTTTTT CGCCGCTTGC ATTGGCCGGC ATGTTCGGGG GGCCGATCGC GGCGGCCTTT
GCCGCGGCGC TGGCGATGGC CTTTCGTTTT GCCGTCGGCG GCACAGCGAT GGTCGACGGG
ATCATCACCA TGGCCGTCGC CACCGGCATT GGTTTGGCCG GTCATTTCTG GACCTTCAAG
AGATCGCCGG GGCTTAAGGA CGTTGCGCTG CTGAGCCTTG CCCTTGGCGT TGCATTGGTC
CTGTCGATGG CCTTGCTTCC CACCTTGGTG AATGCCCATG TGCTCGCCGG CGTCGGTTTC
CCCCTGACGG CATTGAATTG TCTCGCGACT GTTCTGGGTG GTTTCGTTCT GCTGAAGACA
CAGCAATGGG AGCTGGAGCG AAGCATATTG GTGACCGCAT TTTCGCAGTC GCCCGATTAT
CTCTATGTCA AGGACCGAAA CAGCCGGTTC ATCACCGTCA ATGAAAACAT GACCCGCCTC
TTCCGCTTCC GGACCACGGC GGAGATGATC GGATTGTCGG ATTTCAATCT GATGTCGCGG
CCGCTTGCCG AGGAATTATA TTACCTCGAG CAGCAGGTCA TAGACACCGG CGTGCCGCTG
ATCGATTCGA CCGAGCATAT CGAAGGCAGA TTCCTGCTCG CCTCCAAAGT GCCGCTGCGG
GACAAGCAGG GGCGGGTGAT CGGCCTTGCC GGCGTCACGC GCGATGTTAC CGAGCGCACC
GCTCTGGAGC GGGAATTGCG CGAAAGCAAG AACCTGCTCT CGCATGCGAT GGCCAGCATG
TCCGATGGCA TCGCCATGTA CGATAGCAAG GGGTTTATTC TCTTTTGCAA TGAGCAGTAT
CGCAATGCCT TCCCGCTCTC CGGCGAGGCC CGCGTGGTTG GCGCCCATAT CAGCGACATC
CTGCGCCGCG TCGTCGAAAC CGGCGAGCGG CCTGGTATTC CCGATGATGT GGACGGGTGG
ATCAACGCCG CCGCCGCCTC GCTGCACAGC AACAAGGACG AAGAGGTTCA GCTTCACAAC
GGCGACTGGC GCAGCATCCG GACAAGGCTT GCTGAAGACG GCACGGCGAT GGCCGTCGTC
TCCGATATTA CGGCGACGAA ACAGGCGGAA ATCGCACTCA GGCTGTCGGC GGAGGAGTTG
AAGAGCCTTG CCGAGACCGA TGGCCTCACC GGCATGGTCA ACCGCCGGAC CTTCGACGAG
GCTTTCGCCC GCGAAACCTC GGGCAGTGGC AGGAGGAACA TGCTGTTCAG CCTGCTGATG
GTCGATATTG ACCGCTTCAA GGCCTATAAC GACACCTATG GTCATCCTGC CGGAGACCAA
TGCCTGCGGG TCGTCAGCAA GTGCCTGCGC CAATCCGTCA GCCGGCCGGC CGATATCGTC
GCCCGTTACG GCGGTGAGGA ATTCGTGGTG TTCCTGCCCG ACACCAGCGC CAAAGGCGCA
ATGATCGTCG CCGAACAATT CGCCAGGCGC CTCGCCCAGG AGGATATCGT CCATTCAGGC
AGCGAGTTCG CCCGGGTGAC GGCGAGCATC GGGGTATCCT GTGCAACGGG CGCCGAGCTG
CGGACCAACC CGAACCGCCT GCTGACCGAG GCCGACGCGG CGCTCTACGA AGCCAAAACC
CAGGGCCGCA ATCGCATTCT CGCCCATTCG CCCAACGGCG AACGGCATGC CATGAAGGAA
GCCGGTTAG
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| Protein sequence | MMSSLQVLEG GYIAVNGNWT QFGGNLSFVC LAISLWALFS IEFQRRSFRQ EKIAFGIIAG
GASIGSILLA VEFHPGIYID LRFSPLALAG MFGGPIAAAF AAALAMAFRF AVGGTAMVDG
IITMAVATGI GLAGHFWTFK RSPGLKDVAL LSLALGVALV LSMALLPTLV NAHVLAGVGF
PLTALNCLAT VLGGFVLLKT QQWELERSIL VTAFSQSPDY LYVKDRNSRF ITVNENMTRL
FRFRTTAEMI GLSDFNLMSR PLAEELYYLE QQVIDTGVPL IDSTEHIEGR FLLASKVPLR
DKQGRVIGLA GVTRDVTERT ALERELRESK NLLSHAMASM SDGIAMYDSK GFILFCNEQY
RNAFPLSGEA RVVGAHISDI LRRVVETGER PGIPDDVDGW INAAAASLHS NKDEEVQLHN
GDWRSIRTRL AEDGTAMAVV SDITATKQAE IALRLSAEEL KSLAETDGLT GMVNRRTFDE
AFARETSGSG RRNMLFSLLM VDIDRFKAYN DTYGHPAGDQ CLRVVSKCLR QSVSRPADIV
ARYGGEEFVV FLPDTSAKGA MIVAEQFARR LAQEDIVHSG SEFARVTASI GVSCATGAEL
RTNPNRLLTE ADAALYEAKT QGRNRILAHS PNGERHAMKE AG
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