Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rleg2_4879 |
Symbol | |
ID | 6977973 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhizobium leguminosarum bv. trifolii WSM2304 |
Kingdom | Bacteria |
Replicon accession | NC_011368 |
Strand | - |
Start bp | 520185 |
End bp | 520895 |
Gene Length | 711 bp |
Protein Length | 236 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 643394037 |
Product | RNA polymerase sigma factor |
Protein accession | YP_002278855 |
Protein GI | 209546937 |
COG category | [K] Transcription |
COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 0.452771 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACAGCCA TTCCGGTTCC GGTCGCACGA CACCAGCTGC TGCTATCGGC GCTTGCCGAC GCCGACCTCG TGCCGCTCGC AAAAATGGGC GACGAGCCCG CTATCCGCGC CATCGTCAAG CGTCACAATC AGCGCCTGTT CCGCACCGCG CGCGCCGTCA TCCGCAACGA TGCGGAGGCG GAAGATGTCG TCCAGGCCGC CTATATCAAG GCCTTCACCA ACCTGGCGAC GTTCCGGGGC GAGGCGGAGC TTTCGACATG GCTGACCCGC ATTACGCTCA ATGAGGCGCT CGGCCGGATG CGAACCCGAA AGAACACCAC CGGGCTGGAC GAAATCGACA TGCAGGCGAC GTCGGCGGGT GGGGAGGTGG TGCAATTTCC GTCCTCCCTA TCCGCAACAG ATCCCGAAAC CGAGCTGTCG CGGAGCCAGG CTCGGCAGCT CCTCGAACAG GCGGTCGACG AACTCCCGGA TGATTTTCGC GCCATCTTCG TGCTGCGCGA TGTCGAGGGC ATGAGCACCG ACGAGGCCGC ATCCTATCTC GGCATTAGAC CCGAAACCGC CAAGACCCGA TTGCACCGGG CGCGGAAAAT GATGCGCCAG TCGATCGAAA AACGGCTCTC CGGCGCATTC TCGGCGCTGT TCCCCTTCGA TGGCGCCCGC TGCGCCTTCA TGGCCGATCG CGTCGTCGCG GCGCTTAGCG AGCCGTCATA G
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Protein sequence | MTAIPVPVAR HQLLLSALAD ADLVPLAKMG DEPAIRAIVK RHNQRLFRTA RAVIRNDAEA EDVVQAAYIK AFTNLATFRG EAELSTWLTR ITLNEALGRM RTRKNTTGLD EIDMQATSAG GEVVQFPSSL SATDPETELS RSQARQLLEQ AVDELPDDFR AIFVLRDVEG MSTDEAASYL GIRPETAKTR LHRARKMMRQ SIEKRLSGAF SALFPFDGAR CAFMADRVVA ALSEPS
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