Gene Rleg2_4879 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRleg2_4879 
Symbol 
ID6977973 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhizobium leguminosarum bv. trifolii WSM2304 
KingdomBacteria 
Replicon accessionNC_011368 
Strand
Start bp520185 
End bp520895 
Gene Length711 bp 
Protein Length236 aa 
Translation table11 
GC content64% 
IMG OID643394037 
ProductRNA polymerase sigma factor 
Protein accessionYP_002278855 
Protein GI209546937 
COG category[K] Transcription 
COG ID[COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog 
TIGRFAM ID[TIGR02937] RNA polymerase sigma factor, sigma-70 family 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value0.452771 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACAGCCA TTCCGGTTCC GGTCGCACGA CACCAGCTGC TGCTATCGGC GCTTGCCGAC 
GCCGACCTCG TGCCGCTCGC AAAAATGGGC GACGAGCCCG CTATCCGCGC CATCGTCAAG
CGTCACAATC AGCGCCTGTT CCGCACCGCG CGCGCCGTCA TCCGCAACGA TGCGGAGGCG
GAAGATGTCG TCCAGGCCGC CTATATCAAG GCCTTCACCA ACCTGGCGAC GTTCCGGGGC
GAGGCGGAGC TTTCGACATG GCTGACCCGC ATTACGCTCA ATGAGGCGCT CGGCCGGATG
CGAACCCGAA AGAACACCAC CGGGCTGGAC GAAATCGACA TGCAGGCGAC GTCGGCGGGT
GGGGAGGTGG TGCAATTTCC GTCCTCCCTA TCCGCAACAG ATCCCGAAAC CGAGCTGTCG
CGGAGCCAGG CTCGGCAGCT CCTCGAACAG GCGGTCGACG AACTCCCGGA TGATTTTCGC
GCCATCTTCG TGCTGCGCGA TGTCGAGGGC ATGAGCACCG ACGAGGCCGC ATCCTATCTC
GGCATTAGAC CCGAAACCGC CAAGACCCGA TTGCACCGGG CGCGGAAAAT GATGCGCCAG
TCGATCGAAA AACGGCTCTC CGGCGCATTC TCGGCGCTGT TCCCCTTCGA TGGCGCCCGC
TGCGCCTTCA TGGCCGATCG CGTCGTCGCG GCGCTTAGCG AGCCGTCATA G
 
Protein sequence
MTAIPVPVAR HQLLLSALAD ADLVPLAKMG DEPAIRAIVK RHNQRLFRTA RAVIRNDAEA 
EDVVQAAYIK AFTNLATFRG EAELSTWLTR ITLNEALGRM RTRKNTTGLD EIDMQATSAG
GEVVQFPSSL SATDPETELS RSQARQLLEQ AVDELPDDFR AIFVLRDVEG MSTDEAASYL
GIRPETAKTR LHRARKMMRQ SIEKRLSGAF SALFPFDGAR CAFMADRVVA ALSEPS