| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rleg2_4876 |
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| Symbol | |
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| ID | 6977970 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhizobium leguminosarum bv. trifolii WSM2304 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011368 |
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| Strand | + |
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| Start bp | 516021 |
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| End bp | 518213 |
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| Gene Length | 2193 bp |
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| Protein Length | 730 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 643394034 |
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| Product | diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) |
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| Protein accession | YP_002278852 |
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| Protein GI | 209546934 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG5001] Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box
[TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 0.735464 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCCATGG TGAGGAGATC CGTCGTGACA TTGTCCCAAT CGCTTCTGCA GCCGGCCCCT
ATCTTCGACA TTGCCGAGCA CAAGCAGGCA GAGCGGGAGC TCAAGAAGGC GCTTGAATTC
GCAGAGGGGA TCATCGCCGC CATTCCGGAT GTTCTCTTCG AGGTGGATGA GGACGGCCGT
TACCTTCAGG TCTGGACAAG AAACCCCGAA CTGCTGGCCC AGCAGAAGGA GATGCTGCTC
GGCAGGACGG TCAACGACGT TCTTGCGCCC GATCAGGCGG CTATCGCGAT GGAGGCTCTA
CGCGACGCCG GCAAAGAGGG AGTTGCCTAC GGACGATGCA TTCGCATCTC CCTGCCAAAC
GGTGAGACGC GATGGTTCGA GCTGTCGATA GCCAAGCGGC CGAGTGCCGA TCCGGCGGCA
GCCACCACGC TCTTGGCATT CTCGCGAGAT ATCACCGAGC GAAAACAAGC CGAGGACGCC
ATCAACTCCG TGCGGACGCA GTTGCTGAGC GTGCTCCAGA CCATGCCCGA CATGATCTGG
GTCAAGGACA TGAATGGCGT CTATCTGCTG TGCAACCACA CCTTCGAGCG GCTGACCGGG
ATGGCTGAGG CCGAGGTTGT CGGAAAGACG GATTTGGAGC TGTTCGACAT AGAGAGGGCT
CGGTTCTTTC AACAATCGGA CAAAGCGGCG ATCAAGGCCG GCGAATGCAT CCTCAGCGAT
GAGGAATGGG TCGTTTCGCA GGAGAACGGT CAAACCATTC TTCTGGAAAC CCGCAAGGTG
CCGGTCATTG ATGCGGCGGG AGAGGTCGTC GGGGTTCTCG GCGTGGCGCG AGATGTGACC
GAGTTGAACG TCTCGCGCCA GAAAATTCAT CAGATGGCCT TTTATGATCC CTTGACCTCG
CTGCCTAATC GATCGCTGTT CAACGACCGG TTGCGGCAGA TGATCACCTC GGCCGGATCG
CGAGGCCAAC GGGCTGGGCT GATGCTGATC GACATCGACC ATTTCAAGGT GGTCAACGAT
ACGATGGGCC ATCCCGTCGG CGATGATTTG CTTTGTCAGG CAGCGGCCCG CCTCAATGCC
AGCGTTCGCG ATCATGACAC CGTCGCCCGT CTCGGCGGCG ACGAATTCGC GATCCTGTTG
CCGGATATCA GCCAAGGCGA CGATCTCGGC CGGATTGCCA ATAATATCCT CGATAAGTTC
AGGGAGCGCT TCCTGCTGGA TGGTCAGGAG GTCTTCGTTT CATGCAGCGT CGGCATCGCG
CTCTATCCCG ATGACAGCGC CGATGCCAAC GACCTGGTGA AATACGCCGA CTCGGCGATG
TATCTCGCCA AACGCTCGGG ACGAAACAGT TTTCGTTTCT ATTCAAAGGA TCTGACGGCA
AGTGCCGAAG AGCGCATGCG GTTGGAATCG GATTTGCGCC GCGCGATCGA GCGCGGCGAA
CTGGAACTGC ACTATCAGCC CAAGGTGCTT CTGGACAGCG GCGCCATGGT CGGCTGCGAA
GCCTTGCTGA GATGGCGCCA CCCCGAAATG GGTATGATTC CGCCCGTCCG CTTCATTCCG
GTCGCCGAAG ATACGGGGCT GATCGTGGAA CTTGGGCGAT GGGTGCTGCA CGAGGCGTGC
CAGACCGCGG CCGAACTGAA TGCCGATAGC CGCTCACCGC ATAAGGTGGC GATCAATCTG
TCGGTCAAAC AATTCCAATC CGCCGGATTG GTGAAGTCGA TCGCCCAGAT TATCGATGAG
ACCGGTTGCC GCGCCGAATG GGTCGAAATC GAAATAACCG AAAGCCTCCT GCTCGATCAG
AAGGATGAAA CGCTGCAGGC GCTGTCCGAG CTCCGAAGCA TGGGATTTTC GATCGCCATC
GATGATTTCG GCACCGGCTA TTCGGCGCTC AACTATCTGG CGCGCTTCCC GATCGATACG
CTGAAGATCG ACCGGTCGTT CATCAACAGC ACCGACAGAC GCAACGAGGA ACTGGTGAAG
GCGATCCTTT CCATCGCGCG CTGTCTTGGA CAGAGCGTGG TGGCGGAAGG CGTCGAAACC
GCCGAACAGG CAGCTTTCCT CGTGGCAAAC GGATGCGGGA CGGCGCAGGG ATTCCTCTAC
AGCAAAGCCG TGCCCAAGGC TGATATCATC GCCCTGTGGC TGCGTTCTCC AGAGAGCGGC
GCCAACCTGG AAGAGATGCG GTTTTGCGGA TGA
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| Protein sequence | MPMVRRSVVT LSQSLLQPAP IFDIAEHKQA ERELKKALEF AEGIIAAIPD VLFEVDEDGR
YLQVWTRNPE LLAQQKEMLL GRTVNDVLAP DQAAIAMEAL RDAGKEGVAY GRCIRISLPN
GETRWFELSI AKRPSADPAA ATTLLAFSRD ITERKQAEDA INSVRTQLLS VLQTMPDMIW
VKDMNGVYLL CNHTFERLTG MAEAEVVGKT DLELFDIERA RFFQQSDKAA IKAGECILSD
EEWVVSQENG QTILLETRKV PVIDAAGEVV GVLGVARDVT ELNVSRQKIH QMAFYDPLTS
LPNRSLFNDR LRQMITSAGS RGQRAGLMLI DIDHFKVVND TMGHPVGDDL LCQAAARLNA
SVRDHDTVAR LGGDEFAILL PDISQGDDLG RIANNILDKF RERFLLDGQE VFVSCSVGIA
LYPDDSADAN DLVKYADSAM YLAKRSGRNS FRFYSKDLTA SAEERMRLES DLRRAIERGE
LELHYQPKVL LDSGAMVGCE ALLRWRHPEM GMIPPVRFIP VAEDTGLIVE LGRWVLHEAC
QTAAELNADS RSPHKVAINL SVKQFQSAGL VKSIAQIIDE TGCRAEWVEI EITESLLLDQ
KDETLQALSE LRSMGFSIAI DDFGTGYSAL NYLARFPIDT LKIDRSFINS TDRRNEELVK
AILSIARCLG QSVVAEGVET AEQAAFLVAN GCGTAQGFLY SKAVPKADII ALWLRSPESG
ANLEEMRFCG
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