| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rleg2_4835 |
|---|
| Symbol | |
|---|
| ID | 6977929 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhizobium leguminosarum bv. trifolii WSM2304 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011368 |
|---|
| Strand | - |
|---|
| Start bp | 478832 |
|---|
| End bp | 479617 |
|---|
| Gene Length | 786 bp |
|---|
| Protein Length | 261 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 643393996 |
|---|
| Product | pyrroline-5-carboxylate reductase |
|---|
| Protein accession | YP_002278814 |
|---|
| Protein GI | 209546896 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0345] Pyrroline-5-carboxylate reductase |
|---|
| TIGRFAM ID | [TIGR00112] pyrroline-5-carboxylate reductase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 31 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 0.0350204 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAAACCA ACAACATCGG ATTCGTCGGC ACCGGTGCCA TCACCGAAGC GATGGTTCGC
GGGCTTCTGG CCGAACCGGC CTATGTCTCG GAGATTCACG TGTCGCCGCG AAGCGCCCAC
ATTGCCGCGA CATTGGCGGA GGAGTTCGCC TCGGTCAGGA TTGCCGGGGA CAACCAGACC
GTCGTCGATC GCAGCGACAT GGTGTTCCTG GCGATAAGGC CGCAGATCGC CGAGGAGGTC
GTGCGGGCGC TGTCGTTCAG GACCGGCCAG ACGGTCGTCA GCCTCGTTGC GGCGACGGAG
CGCCAGGCCC TGCTCGAATG GATCGGTGCC GATATCGATC TCGTCCAGGC CATCCCCCTG
CCCTTCGTCG CACAGCGGCA AGGCGTCACC GCCATCTATC CCGCCAATGC CGCCATCGCG
GCGCTGTTCG ACACGCTGGG AACGGCCGTG CAATGTCAGT CGCGGAAGGA GTACGATCTC
CTCGCGGCCG CAAGCGCTGT CATGTCGACC TATTTCGGCG TCATGGAGTC GATCACTGGC
TGGCTGGAAA AAAGCGGCCT CGAAAGAGCT AAGGGCCAAG CCTATATTGC TCCGCTCTTT
GCAAGCCTGG CGCAGAAAGC CAACAACCCC GGTAACGAGC CGTTCAGCGC GCTGAGCCGC
GAATTTGCCA CCAAGGGCGG CCTGAACGAG CAGGTTCTTT CGGACTTCGA CAAGCAGGGC
GGTCTTGCCG CGCTCAACGG CGCCCTCGAC GGCGTGCTTG CCCGCATCGA GGGCCGCAGG
AGCTGA
|
|---|
| Protein sequence | MKTNNIGFVG TGAITEAMVR GLLAEPAYVS EIHVSPRSAH IAATLAEEFA SVRIAGDNQT
VVDRSDMVFL AIRPQIAEEV VRALSFRTGQ TVVSLVAATE RQALLEWIGA DIDLVQAIPL
PFVAQRQGVT AIYPANAAIA ALFDTLGTAV QCQSRKEYDL LAAASAVMST YFGVMESITG
WLEKSGLERA KGQAYIAPLF ASLAQKANNP GNEPFSALSR EFATKGGLNE QVLSDFDKQG
GLAALNGALD GVLARIEGRR S
|
|---|
| |