Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rleg2_4753 |
Symbol | |
ID | 6977847 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhizobium leguminosarum bv. trifolii WSM2304 |
Kingdom | Bacteria |
Replicon accession | NC_011368 |
Strand | + |
Start bp | 384092 |
End bp | 385945 |
Gene Length | 1854 bp |
Protein Length | 617 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 643393920 |
Product | glycoside hydrolase 15-related |
Protein accession | YP_002278738 |
Protein GI | 209546820 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG3387] Glucoamylase and related glycosyl hydrolases |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.392129 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAATTTTC GGACAAAAGC CAGTCCTGAA GCCGGGATCT CGACTATAGG CAGCGCAATT CCTCGCCCTA TCGCAGACCA TGGAATAATT GGCGATCTCG CCACGCTTGC CCTCGTCGCC AAGGACGGCG CAATTGACTT CATGTGCTGG CCGAACTTCG ATAGCCCGAC GATTTTCGCA GGGCTTCTCG ATCCAGAGCG CGGGGGCGCC TTTGAACTGG CCCCCGATAT CCCCGATGCG CGGGTGGTCC AGCAATATCT GCCGGACACG AACGTGCTTC TCACACGCTG GATGGGCGAT CACGTAAGCG CTGAGCTGAT TGACTTCATG GTCGTCAAAG AAGGCAGGGG GGATATTCCG ACAACGGTAG CCAGAAGGCT GAGGGTGACC CGTGGTGAGG CAAGCTTCAT CATGCGCTGC GCCCCGCGCT TTGATTACGC CCGGGAAACC GTGACTGCGC ATGTGACGGC GAACCAGGCG GTGTGGCAGC CAGTCAATGC ACATGGAATC CGATTGACGT CGAACATCCC GCTTGCCGGC GACACCGACG GCGCTCGTGC GACCGCTCGC CTCGCAGCTG GCGAAACCGC TGATTTCCTC CTCGCGGGAA TTGATGAAGA GCCGATCGAG CTTCCGGATA TTCACGAATT TGAGAAAGCG ACGATCGAAT ACTGGCAAGA TTGGGCAGCG CAGTCATCGT ACCAAGGTCG TTGGCGCGAA ATGGTGACGC GGTCTGCGTT GACACTCAAG CTCATGACAT CCCGTCGGCA TGGTTCCGTC ATCGCGGCGG GAACGTTTGG CCTGCCGGAA ACGCCAGGCG GCGCGCGCAA TTGGGATTAC CGCGCGACAT GGATCAGGGA CGCATCTTTT ACAGTTTATG CTCTCATGCG CCTTGGCTAT CAGCAGGAAG CCCAGGCATT TAACACATGG ATCGGCAAGC GCGCCACGAA GTGCCAGGGC AGCGGAAAGC TCGACATCAT GTATACGGTC GACGGACGAA GGGTGCCCGA CGAAGTCGCC CTTGAACACT TCGCTGGCTA CGGCGGTGCC CGCCCGGTCC GCATCGGAAA CGACGCGGTG GAACAAATCC AGCTCGATAT CTACGGCGAG CTCATGGACG CGGTCTATCT CAGCAACAAA TATGGCCATG CCATCTCTCA CGATGGCTGG AACGGCGTGC GTGACGTCAT CAATTATGTC TGTGATCACT GGGAAGAGCC AGATGCTGGG ATTTGGGAAA TGCGCCGCGA GCCTCAGCAT TTCCTGCATT CGCGCTTGAT GTGCTGGGTC GCAGTCGACA GGGCGATCAG GCTTGCAAAT AAACGATCAC TCGCGGCCCC GTTCAGTCGA TGGATCGATG TCCGAAACCT GATCTACGAG GACATCTGGG CAAACTTCTG GGATGAACAG ACCGGGCATT TCGTGCAGAC AAGGGGCGGG AAGAGCCTCG ACGCCTCCTT GCTGTTGATG CCGCTGGTCA GGTTCGTCAG TGCAACTGAC CCCCGATGGC TCTCTACTCT CGAGGCAATC GGGATGGCTC TCGTAGATGA CGGCCTTGTC TATCGTTATA GGAGCGACGA TGGATTACAC GGTCAGGAGG GCGCATTCTC GGCCTGTTCT TTCTGGTACG CGGAATGTCT GGCGCGGGCT GGCGATATTG CGAAAGCCCG ACGCGTTTTT GAGGCCGTAC TGACTTATGC CAACCATCTC GGCCTTTACG CAGAGGAGTT CGACACTCGC GCAAGCCTGT CGGGAAACTT CCCACAGGCC TTCACGCACA TGGCGCTGAT AAGTGCAGCC TACTATCTCG ATCGCGAGTT GGACGGGAAA AAGGCTCAGG AATGGCGACC TTAA
|
Protein sequence | MNFRTKASPE AGISTIGSAI PRPIADHGII GDLATLALVA KDGAIDFMCW PNFDSPTIFA GLLDPERGGA FELAPDIPDA RVVQQYLPDT NVLLTRWMGD HVSAELIDFM VVKEGRGDIP TTVARRLRVT RGEASFIMRC APRFDYARET VTAHVTANQA VWQPVNAHGI RLTSNIPLAG DTDGARATAR LAAGETADFL LAGIDEEPIE LPDIHEFEKA TIEYWQDWAA QSSYQGRWRE MVTRSALTLK LMTSRRHGSV IAAGTFGLPE TPGGARNWDY RATWIRDASF TVYALMRLGY QQEAQAFNTW IGKRATKCQG SGKLDIMYTV DGRRVPDEVA LEHFAGYGGA RPVRIGNDAV EQIQLDIYGE LMDAVYLSNK YGHAISHDGW NGVRDVINYV CDHWEEPDAG IWEMRREPQH FLHSRLMCWV AVDRAIRLAN KRSLAAPFSR WIDVRNLIYE DIWANFWDEQ TGHFVQTRGG KSLDASLLLM PLVRFVSATD PRWLSTLEAI GMALVDDGLV YRYRSDDGLH GQEGAFSACS FWYAECLARA GDIAKARRVF EAVLTYANHL GLYAEEFDTR ASLSGNFPQA FTHMALISAA YYLDRELDGK KAQEWRP
|
| |