Gene Rleg2_4716 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRleg2_4716 
Symbol 
ID6977810 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhizobium leguminosarum bv. trifolii WSM2304 
KingdomBacteria 
Replicon accessionNC_011368 
Strand
Start bp354295 
End bp355320 
Gene Length1026 bp 
Protein Length341 aa 
Translation table11 
GC content62% 
IMG OID643393889 
Producttranscriptional regulator, AraC family 
Protein accessionYP_002278707 
Protein GI209546789 
COG category[K] Transcription 
COG ID[COG4977] Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones37 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.777825 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCATCG TTATTCTTTC CCCTCCCGGC GTCCAGTCTC TGGATATCGT CGGTCCGGCC 
GAAGTCTTTT GGGAAGCCGC TCGAAGGCTG GGCGACATGG ACGCATACGA CATACAGATC
ATGTCGACGG GAGCGCCGTC TGTCAGCGGA ACCGGACAGC TTCGGTTCCT GGCCGACCGG
ACGATCTTCG ACCCGGACGA GCCGATCGAC ACGCTGCTTG TCGCCGGCGA TCCGTCGTTC
CAGACGATCG ATCCGGACGT GATCGCATGG CTGCAGCGGC GGGTGCCGAT GGTCCGGCGC
TTCGGGTCGA TCTGCACCGG AGTGTTCCTG CTGGCGGCCG CGGGGCTGCT CGAGGGAAAG
AAGGTGACGA CGCACTGGGA ATGTGCCGAC AAGTTCGCCA GAGATTTTCC GGCAATCGAT
CTCGATCACG ACGCGATCTA TATTCGCGAC GGCGCGCTCA TCACCGCGGC GGGCGTCACG
TCCGGCATCG ATCTGGCGCT CTCGCTGGTC GAAGAGGATC ACGGGCGCGA CATCGCGATG
ATCGTCGCCC GCTACATGGT GATGTTCATG AAGCGCCCGG GCGGACAATC GCAGTTCAGC
GCCCATCTCG TCGGCCAGAT GTCGGAAACG ACACTGATCC AGAAAGCGCA GGAATATGTG
CTGGCAAATC TCGGCGCTCC GCTCGCCGTC GATGATCTTG CGCAGAAGAT CGGGATGAGC
AAACGCAATT TTGCCCGCGT ATTCCGCCGC GAGCTCGGCA TAACGCCGGC GGATTTCGTC
ACGGCGGCGC GAACCGATGC CGCCCGTCGC TTGCTGGAGG ATACTGCCCA GCCGCTGCAG
AAAATCGCCA CCATGTGCGG CTTTACCGAT GTCAATAAGA TGCGCCGTGC CTTTACGCGA
ACGATCGGGG TCAGCCCGAA CGACTATCGC TGCCGTTTTC AACGGCCAAC GCCCACCAGC
TTCGAGCGTT CGAAACACAG TGCCTACGAG ACACGTCCGG CATCGCGGTC GGAACTGCAA
TTATGA
 
Protein sequence
MRIVILSPPG VQSLDIVGPA EVFWEAARRL GDMDAYDIQI MSTGAPSVSG TGQLRFLADR 
TIFDPDEPID TLLVAGDPSF QTIDPDVIAW LQRRVPMVRR FGSICTGVFL LAAAGLLEGK
KVTTHWECAD KFARDFPAID LDHDAIYIRD GALITAAGVT SGIDLALSLV EEDHGRDIAM
IVARYMVMFM KRPGGQSQFS AHLVGQMSET TLIQKAQEYV LANLGAPLAV DDLAQKIGMS
KRNFARVFRR ELGITPADFV TAARTDAARR LLEDTAQPLQ KIATMCGFTD VNKMRRAFTR
TIGVSPNDYR CRFQRPTPTS FERSKHSAYE TRPASRSELQ L