| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rleg2_4621 |
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| Symbol | |
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| ID | 6977715 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhizobium leguminosarum bv. trifolii WSM2304 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011368 |
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| Strand | + |
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| Start bp | 256868 |
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| End bp | 258814 |
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| Gene Length | 1947 bp |
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| Protein Length | 648 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 643393796 |
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| Product | diguanylate cyclase/phosphodiesterase |
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| Protein accession | YP_002278614 |
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| Protein GI | 209546696 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG5001] Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.334588 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 0.654105 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCGCGG CTGACGCTCC TGTGCAGCGC GATGAATCAA CCGACTGCTT TTCATTCGCC
GAGGCCTGCA AGTCTCTGGA AACGGAAAAT GATGCTGTCC GCAGGCGAAG CTCACGGCAC
GGTCTTTGGA TCGCGGTCGC CGTCTATGTG GCCTTCGCAC TTCCCGACCG ATGGCTTATC
CCCGATGTTG CGCCTGCGAC GATCGCCGCG CGATTCGTCG TCGCAACGAT CGCGCTGCTG
GCTTTCGAAG CCTTGCGACT GGCCAAAGCA AAAACCGTCT GGCTGGACAT CACCTGCGCC
TCGGCACTGC TTGCCGGTTA TTTGGGCTGG CTTTACCCGG CGATTGGCAC CAGCGACGTC
ACCGCCATGT CATACTACAT GATATTTGGC GCCATCTTCA TGATGGGCGC CAACCTGTTT
TTCAGTTTCC CGTTTCGGCT TTCGGTGATC ACCTCCAGCT TCGTGCTCGG CGCATTTTTC
GTGACGATCG AGGCGTTTTT CCCTTCAAGC CAAACCTACA AGCTTGCCTT CGGGATGTTC
TACATTTCGT GCTTCGTCTT CACGTCTTTC GTGAATTGGC GATTGAACGT GGAGCGTCGC
AACGTGTTGC TGAATGCGGC CGAGGCTCGA TATCAGCACT GGGAAGCGTC CGAGCGTGGA
CGGTCACTGC TCGAGCTTTC AAATACCGAT TACCTGACAG GCATAAGCAA CCGGCGCGCC
CTGGATCGGC GGCTCGACGA ATGCTGGGCC GCCTGGAAAG ACGAACGCCG CGACTTCGTC
GTGTTGCTCA TCGACGTCGA TTTTTTCAAA CGCTTCAATG ATCGCTACGG GCATCAAGAA
GGAGACCGAT GCCTGACTGT CATCGCCAAA GTGCTGAAGG CCGTCGTCGA GTCGTCCGGT
GGCATGATCG GCAGGTATGG TGGCGAAGAG TTTATCGTGG TCTTGCCGGT CCAAACTCCC
AAGATCGCGA TGAGCCTGGC CGAAAAGATC AGAATGGAAG TCGAGTTTCT TGCGATCGAG
CACGACGGGC GACCGGATGA CAGCCCGATC GTAACCGTCA GCATCGGCGT CGCCTTCACC
CGCGACAACG TTGGAGAGAA GGTTGAACGA TTAGTGCGAG AGGCCGATCT TGCTCTCTAC
CATGCCAAAG CAAGCGGCCG AAACTGCATT CGCAGGTTTG ATCCGCTGTT GCCTCGCCCG
GACGACAATG CCGGTAAACT CGTCCCACTG CTGACGGCCG CCATCGATCG CAAACTGGTC
TCGCTCGTTT ACCAACCGAT CTTCGAGTTG ACGAACGAGA AAGCAAGAGC TGTCGAGGCT
TTGATGCGGC TTCGGATGCC GGACGGCACC GCAGTTTCGC CGAAAACATT CATTCCGGTT
GCAGAGCGAA CGGGCGCTAT CCTCGAATTG GGCAAGTGGG CGATCGAGAC GGCATGCCGT
GACATACTGA TGACCGATCG CATGGCGACC GTCAGCGTCA ACGTGTCGCC CATACAGCTG
CGTTCCCAAG GCTTTGCTGC GAATGTCGCT GACATTCTTA TTCGCTGCGG GGTCAGCGGA
TCGCGCCTGG CCTTGGAAGT CACCGAGGGC CTGGATATGG ATATGCAGTC GGAGGTGCTT
AAGTGCATTG CAGATCTGCG GGCTCTCGGC GTCGAAATCT GGCTTGACGA CTTCGGCTCC
GGCTTTGCGG GCCTCTCTTG GCTGAGGGCG ATCGAGTTTC AGACGGTCAA GGTCGATCGA
ACCTTCCTGC ACGACTGCTC CAACCCGCGC GGGTTGATGA TGCTCCAGGA CATGGTCGCT
CTTATCCGCA ATCGTGGGAA TACGATCCTG GTGGAAGGCG TCGAAACGGC AGCACAATTG
TCCCTGCTCA AGGATCTTCG CATCGACCGC GTCCAGGGCT ATCATATGGG AATGCCGGTG
AGCGCTGAAC TTTTGAACGC GGCATAA
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| Protein sequence | MSAADAPVQR DESTDCFSFA EACKSLETEN DAVRRRSSRH GLWIAVAVYV AFALPDRWLI
PDVAPATIAA RFVVATIALL AFEALRLAKA KTVWLDITCA SALLAGYLGW LYPAIGTSDV
TAMSYYMIFG AIFMMGANLF FSFPFRLSVI TSSFVLGAFF VTIEAFFPSS QTYKLAFGMF
YISCFVFTSF VNWRLNVERR NVLLNAAEAR YQHWEASERG RSLLELSNTD YLTGISNRRA
LDRRLDECWA AWKDERRDFV VLLIDVDFFK RFNDRYGHQE GDRCLTVIAK VLKAVVESSG
GMIGRYGGEE FIVVLPVQTP KIAMSLAEKI RMEVEFLAIE HDGRPDDSPI VTVSIGVAFT
RDNVGEKVER LVREADLALY HAKASGRNCI RRFDPLLPRP DDNAGKLVPL LTAAIDRKLV
SLVYQPIFEL TNEKARAVEA LMRLRMPDGT AVSPKTFIPV AERTGAILEL GKWAIETACR
DILMTDRMAT VSVNVSPIQL RSQGFAANVA DILIRCGVSG SRLALEVTEG LDMDMQSEVL
KCIADLRALG VEIWLDDFGS GFAGLSWLRA IEFQTVKVDR TFLHDCSNPR GLMMLQDMVA
LIRNRGNTIL VEGVETAAQL SLLKDLRIDR VQGYHMGMPV SAELLNAA
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