Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rleg2_4549 |
Symbol | |
ID | 6977643 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhizobium leguminosarum bv. trifolii WSM2304 |
Kingdom | Bacteria |
Replicon accession | NC_011368 |
Strand | - |
Start bp | 186609 |
End bp | 187382 |
Gene Length | 774 bp |
Protein Length | 257 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 643393726 |
Product | short-chain dehydrogenase/reductase SDR |
Protein accession | YP_002278544 |
Protein GI | 209546626 |
COG category | [R] General function prediction only |
COG ID | [COG4221] Short-chain alcohol dehydrogenase of unknown specificity |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 0.513752 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 0.094172 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCATTCT CCGACTACAA GACCGCACTG GTGACCGGCG CATCCTCCGG TATCGGCGCA GCCGTGGTTG AACGGCTTCG CCGGGAGAAC ATCGAAGTCC ATGCCGTTGC CCGCAGCGCT GACGCGCTGC AGCAGCTGGC AGAACGCACT GGCTGCGTCG CCCACGCCAT CGATGTGACC GACCGGCCGG CGATCGCCGA ACTCGCGCGT CGGGTGGAAT TCGACATCCT CGTCAACAAT GCCGGCGTCG ACCGGCCGAA GAAATTCCTC GAAGCCGACG AGGGCGATAT CGATCTCATC GTCGACGTCA ATCTGCGGGC GGTATTGCAC ATCTGCCGGC TGGTCGTGCC GGGCATGGTG GCGCGGGACC GCGGCCACGT CATCAACATC TCGTCGATCG CCGGCGCCTA TAATTTCGGT GGCAATTCCT CCTATCACGC CACCAAGGCA GGGGTGAGCA TGCTGTCCAA CCAGCTACGC ATCGACGCTT TCGGCAAGCG GGTGCGGGTC ACGGAAATCT GCCCCGGCCG CGTCGCCACT GATATTTTCA ATCACGTCCA CGGCGATGAT CCGAGCATCC GGGAACGGTT CATCGATGGT TTCGAACTGC CGCAGGCGGG CGATATCGCC GACGCGATCG CCTTCGCCAT ATCGGCCCCG GTCGCCGTCA ACATCGGACA TATGGAGATC ACGCCAACGC TGCAGGTCAT GGGCGGCCTG CAGACCGCAA GGCCGCAGCT GAAGACGGAT CCATCCGGGG AGCCAACCCC GTGA
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Protein sequence | MPFSDYKTAL VTGASSGIGA AVVERLRREN IEVHAVARSA DALQQLAERT GCVAHAIDVT DRPAIAELAR RVEFDILVNN AGVDRPKKFL EADEGDIDLI VDVNLRAVLH ICRLVVPGMV ARDRGHVINI SSIAGAYNFG GNSSYHATKA GVSMLSNQLR IDAFGKRVRV TEICPGRVAT DIFNHVHGDD PSIRERFIDG FELPQAGDIA DAIAFAISAP VAVNIGHMEI TPTLQVMGGL QTARPQLKTD PSGEPTP
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