| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rleg2_4548 |
|---|
| Symbol | |
|---|
| ID | 6977642 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhizobium leguminosarum bv. trifolii WSM2304 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011368 |
|---|
| Strand | - |
|---|
| Start bp | 185905 |
|---|
| End bp | 186612 |
|---|
| Gene Length | 708 bp |
|---|
| Protein Length | 235 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 643393725 |
|---|
| Product | polar amino acid ABC transporter, inner membrane subunit |
|---|
| Protein accession | YP_002278543 |
|---|
| Protein GI | 209546625 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0765] ABC-type amino acid transport system, permease component |
|---|
| TIGRFAM ID | [TIGR01726] amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 0.604934 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 18 |
|---|
| Fosmid unclonability p-value | 0.14164 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGAGCGGTT TCGACCTTTC GGCAATCCTC GGAAATCCCG AATATGCCGC CATGCTGCTG
CGTGGCATCG AGATGACCTT CATCATCTTT GCCGGATCCT GGTCGCTGGC GATGGCGCTG
GCAGTTCTGC TGCTCAGCTT GCGTCTGTCA CCCTTTCGCT TCGGCGATCC GTTGGTCGCT
GCTTACGTAT CCTACCACCG CAACGTGCCC ACCCTGGTTC AACTGATGCT GTGGTATTTC
GGGATCTTCA CTTTGATGCC GAGCGGGCTG GGAGAATGGC TTTCCGTCCA CAATGCCGAG
GCCATCTTCG CGGTGATCGG TCTCGGGCTC TGCCAGGCGG CCTATTTCAG CGAAGATCTT
CGTTCGGGCG TGCGCTCGGT CGGTCCCGGC CAGATGGAGG CAGCCCGGGC GCTGGGCCAC
GGTTATGTCT CGGCGATGCG TTTCGTCATC ATGCCGCAAG GCGTGCGCAA CGCACTGCCG
CCGCTCATCA ATCACAGCGT TTCCCTATTC AAGAACAGCA GCCTGGCCGT CATCATCGGG
GCCTCGGAAC TGACGCATGC GGTCAAGGAA ATCGAGAACC TCAGCTTCCG GACCTTCGAG
ATCTACCTGA TCGGCACCGT TCTCTATCTC TTCTTCTCGC TCGTGATCAT GAGCATCGGC
GCCTATCTGT CGATGCGCGC AGATCCTGCC AGGAGCGCGC GGGCATGA
|
|---|
| Protein sequence | MSGFDLSAIL GNPEYAAMLL RGIEMTFIIF AGSWSLAMAL AVLLLSLRLS PFRFGDPLVA
AYVSYHRNVP TLVQLMLWYF GIFTLMPSGL GEWLSVHNAE AIFAVIGLGL CQAAYFSEDL
RSGVRSVGPG QMEAARALGH GYVSAMRFVI MPQGVRNALP PLINHSVSLF KNSSLAVIIG
ASELTHAVKE IENLSFRTFE IYLIGTVLYL FFSLVIMSIG AYLSMRADPA RSARA
|
|---|
| |